Detailed information    

insolico Bioinformatically predicted

Overview


Name   kre   Type   Regulator
Locus tag   C7M26_RS06905 Genome accession   NZ_CP028212
Coordinates   1291725..1292189 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain SRCM102748     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1286725..1297189
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M26_RS06885 (C7M26_01355) fadH 1287913..1288677 (-) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -
  C7M26_RS06890 (C7M26_01356) ppeE 1288820..1289680 (+) 861 WP_032721462.1 metallophosphoesterase -
  C7M26_RS06895 (C7M26_01357) ltdD 1289737..1290231 (+) 495 WP_072557193.1 L,D-transpeptidase family protein -
  C7M26_RS06900 (C7M26_01358) ykuC 1290307..1291599 (+) 1293 WP_017697269.1 MFS transporter -
  C7M26_RS06905 (C7M26_01359) kre 1291725..1292189 (+) 465 WP_003232406.1 YkyB family protein Regulator
  C7M26_RS06910 (C7M26_01360) cheV 1292233..1293144 (-) 912 WP_014476655.1 chemotaxis protein CheV -
  C7M26_RS06915 (C7M26_01361) - 1293348..1293509 (+) 162 WP_003245246.1 hypothetical protein -
  C7M26_RS06920 (C7M26_01362) dapX 1293711..1294892 (+) 1182 WP_015252196.1 aminotransferase A -
  C7M26_RS06925 (C7M26_01363) kinA 1294902..1296722 (-) 1821 WP_015252197.1 sporulation histidine kinase KinA -

Sequence


Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=283091 C7M26_RS06905 WP_003232406.1 1291725..1292189(+) (kre) [Bacillus subtilis strain SRCM102748]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=283091 C7M26_RS06905 WP_003232406.1 1291725..1292189(+) (kre) [Bacillus subtilis strain SRCM102748]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAGCCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains


Predicted by InterproScan.

(14-128)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment