Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   C7M26_RS06795 Genome accession   NZ_CP028212
Coordinates   1272385..1272960 (-) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102748     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1267385..1277960
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M26_RS06770 (C7M26_01332) mobB 1267781..1268302 (-) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  C7M26_RS06775 (C7M26_01333) glp 1268263..1269555 (-) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  C7M26_RS06780 (C7M26_01334) moeB 1269573..1270592 (-) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  C7M26_RS06785 (C7M26_01335) mobA 1270643..1271242 (-) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  C7M26_RS06790 (C7M26_01336) cse15 1271379..1272344 (+) 966 WP_032721476.1 spore protein Cse15 -
  C7M26_RS06795 (C7M26_01337) rok 1272385..1272960 (-) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  C7M26_RS06800 (C7M26_01338) ykuV 1273426..1273872 (-) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  C7M26_RS06805 (C7M26_01339) ahpA 1273944..1274486 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  C7M26_RS06810 (C7M26_01340) mscT 1274723..1275526 (+) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  C7M26_RS06815 (C7M26_01341) ykuS 1275563..1275808 (-) 246 WP_003232382.1 YkuS family protein -
  C7M26_RS06820 (C7M26_01342) dapI 1275870..1276994 (-) 1125 WP_032721474.1 N-acetyldiaminopimelate deacetylase -
  C7M26_RS06825 (C7M26_01343) dapD 1277064..1277774 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=283090 C7M26_RS06795 WP_003232378.1 1272385..1272960(-) (rok) [Bacillus subtilis strain SRCM102748]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=283090 C7M26_RS06795 WP_003232378.1 1272385..1272960(-) (rok) [Bacillus subtilis strain SRCM102748]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment