Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | C7M26_RS01370 | Genome accession | NZ_CP028212 |
| Coordinates | 220055..220390 (-) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain SRCM102748 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 215055..225390
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M26_RS01320 (C7M26_00256) | comGC | 215073..215369 (+) | 297 | WP_029726719.1 | comG operon protein ComGC | Machinery gene |
| C7M26_RS01325 (C7M26_00257) | comGD | 215359..215790 (+) | 432 | WP_029726720.1 | comG operon protein ComGD | Machinery gene |
| C7M26_RS01330 (C7M26_00258) | comGE | 215774..216121 (+) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| C7M26_RS01335 | comGF | 216147..216530 (+) | 384 | WP_032722118.1 | ComG operon protein ComGF | Machinery gene |
| C7M26_RS01340 (C7M26_00259) | comGG | 216531..216905 (+) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| C7M26_RS01345 (C7M26_00260) | spoIITA | 216977..217156 (+) | 180 | WP_029726723.1 | YqzE family protein | - |
| C7M26_RS01350 (C7M26_00261) | yqzG | 217198..217524 (-) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| C7M26_RS01355 (C7M26_00262) | tapA | 217796..218557 (+) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C7M26_RS01360 (C7M26_00263) | sipW | 218541..219113 (+) | 573 | WP_072692741.1 | signal peptidase I SipW | - |
| C7M26_RS01365 (C7M26_00264) | tasA | 219177..219962 (+) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| C7M26_RS01370 (C7M26_00265) | sinR | 220055..220390 (-) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| C7M26_RS01375 (C7M26_00266) | sinI | 220424..220597 (-) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| C7M26_RS01380 (C7M26_00267) | yqhG | 220780..221574 (-) | 795 | WP_015714249.1 | YqhG family protein | - |
| C7M26_RS01385 (C7M26_00268) | hepAA | 221595..223268 (-) | 1674 | WP_029726726.1 | SNF2-related protein | - |
| C7M26_RS01390 (C7M26_00269) | gcvT | 223710..224798 (+) | 1089 | WP_004398598.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=283079 C7M26_RS01370 WP_003226345.1 220055..220390(-) (sinR) [Bacillus subtilis strain SRCM102748]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=283079 C7M26_RS01370 WP_003226345.1 220055..220390(-) (sinR) [Bacillus subtilis strain SRCM102748]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
ACAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
ACAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |