Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   C7M26_RS01030 Genome accession   NZ_CP028212
Coordinates   163326..164093 (+) Length   255 a.a.
NCBI ID   WP_014477369.1    Uniprot ID   A0A0D1L7G7
Organism   Bacillus subtilis strain SRCM102748     
Function   ssDNA annealing; plasmid transformation (predicted from homology)   
DNA processing Homologous recombination

Genomic Context

Location: 158326..169093
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M26_RS01000 (C7M26_00191) pgpH 158622..160757 (+) 2136 WP_010886570.1 cyclic-di-AMP phosphodiesterase PgpH -
  C7M26_RS01005 (C7M26_00192) ybeY 160758..161231 (+) 474 WP_032722131.1 rRNA maturation RNase YbeY -
  C7M26_RS01010 (C7M26_00193) unpK 161212..161583 (+) 372 WP_015384119.1 diacylglycerol kinase family protein -
  C7M26_RS01015 (C7M26_00194) - 161702..162112 (+) 411 WP_032722130.1 cytidine deaminase -
  C7M26_RS01020 (C7M26_00195) era 162093..162998 (+) 906 WP_003230051.1 GTPase Era -
  C7M26_RS01025 (C7M26_00196) yqzL 163146..163289 (+) 144 WP_003230053.1 YqzL family protein -
  C7M26_RS01030 (C7M26_00197) recO 163326..164093 (+) 768 WP_014477369.1 DNA repair protein RecO Machinery gene
  C7M26_RS01035 (C7M26_00198) glyQ 164390..165277 (+) 888 WP_003226213.1 glycine--tRNA ligase subunit alpha -
  C7M26_RS01040 (C7M26_00199) glyS 165270..167309 (+) 2040 WP_032722129.1 glycine--tRNA ligase subunit beta -
  C7M26_RS01045 (C7M26_00200) ccpN 167442..168080 (+) 639 WP_003237058.1 transcriptional regulator CcpN -
  C7M26_RS01050 (C7M26_00201) ppsR 168106..168918 (+) 813 WP_032722128.1 pyruvate, water dikinase regulatory protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29342.05 Da        Isoelectric Point: 8.3080

>NTDB_id=283071 C7M26_RS01030 WP_014477369.1 163326..164093(+) (recO) [Bacillus subtilis strain SRCM102748]
MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQPFLYGSFLMQKTSGLGTLQQGEMILSMRG
IREDLFLTAYAAYIAELVDRGTEEKKPNPYLFEFILESLKQLNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSQDG
TFHFSVRDNGFICHRCFEKDPYRIPIKPQTARLLRLFYYFDLSRLGNVSLKEETKAELKQVIDLYYEEYSGLYLKSKRFL
DQMESMKHLMGENKS

Nucleotide


Download         Length: 768 bp        

>NTDB_id=283071 C7M26_RS01030 WP_014477369.1 163326..164093(+) (recO) [Bacillus subtilis strain SRCM102748]
ATGCTGACAAAATGTGAAGGAATCGTTCTTCGCACAAATGATTACGGAGAGACGAATAAAATCGTAACTTTACTGACAAG
AGAACACGGAAAAATAGGTGTTATGGCACGAGGCGCCAAAAAACCGAACAGCCGTTTATCAGCAGTCAGCCAGCCCTTTT
TGTATGGTTCTTTCTTAATGCAAAAAACATCGGGCCTCGGAACGCTTCAGCAGGGGGAAATGATCCTCAGCATGAGAGGC
ATCAGGGAAGACTTGTTTTTAACAGCATATGCTGCCTATATTGCTGAGTTAGTCGACAGAGGCACAGAAGAAAAAAAGCC
AAATCCTTATTTATTTGAATTCATATTAGAGTCATTAAAACAGCTGAATGAAGGAACAGATCCGGATGTTATCACCTTCA
TTGTTCAAATGAAGATGCTCGGTGTCATGGGCCTGTATCCTGAGCTAAATCATTGTGTACATTGTAAAAGCCAAGACGGA
ACCTTTCATTTCTCTGTTCGTGATAATGGTTTTATATGCCACCGCTGTTTTGAAAAAGATCCTTACAGGATACCGATCAA
ACCGCAAACGGCAAGGCTGTTAAGACTCTTTTACTATTTTGATCTGTCGAGGCTCGGCAATGTGTCCTTAAAAGAGGAAA
CAAAAGCTGAATTAAAGCAAGTGATTGATTTATATTACGAAGAATATTCGGGATTGTATTTAAAATCAAAGCGCTTTTTA
GATCAAATGGAAAGCATGAAACATCTTATGGGTGAAAACAAAAGTTGA

Domains

Predicted by InterproScan.

Recombination protein O N terminal (RecO_N)

(1-75)

Recombination protein O C terminal (RecO_C)

(82-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L7G7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Bacillus subtilis subsp. subtilis str. 168

99.608

100

0.996

Multiple sequence alignment