Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   C7M25_RS17850 Genome accession   NZ_CP028211
Coordinates   3624710..3625174 (+) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain SRCM102747     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3619710..3630174
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M25_RS20765 - 3620218..3620713 (-) 496 Protein_3490 hypothetical protein -
  C7M25_RS17830 (C7M25_03587) fadH 3620878..3621642 (-) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  C7M25_RS17835 (C7M25_03588) - 3621787..3622650 (+) 864 WP_015239758.1 metallophosphoesterase -
  C7M25_RS17840 (C7M25_03589) - 3622725..3623219 (+) 495 WP_088462390.1 L,D-transpeptidase family protein -
  C7M25_RS17845 (C7M25_03590) - 3623295..3624587 (+) 1293 WP_015239757.1 MFS transporter -
  C7M25_RS17850 (C7M25_03591) kre 3624710..3625174 (+) 465 WP_003154622.1 YkyB family protein Regulator
  C7M25_RS17855 (C7M25_03592) cheV 3625218..3626129 (-) 912 WP_007409609.1 chemotaxis protein CheV -
  C7M25_RS20500 (C7M25_03593) - 3626318..3626479 (+) 162 WP_007409608.1 hypothetical protein -
  C7M25_RS17860 (C7M25_03594) - 3626680..3627893 (+) 1214 Protein_3498 aminotransferase A -
  C7M25_RS17865 (C7M25_03595) - 3627874..3629694 (-) 1821 WP_160223020.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=283051 C7M25_RS17850 WP_003154622.1 3624710..3625174(+) (kre) [Bacillus velezensis strain SRCM102747]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=283051 C7M25_RS17850 WP_003154622.1 3624710..3625174(+) (kre) [Bacillus velezensis strain SRCM102747]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAGTCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment