Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   EB818_RS06015 Genome accession   NZ_CP033335
Coordinates   1174053..1174235 (-) Length   60 a.a.
NCBI ID   WP_129322727.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY208     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1169053..1179235
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EB818_RS06000 (EB818_06010) - 1169490..1170185 (-) 696 WP_002983928.1 phosphoglycerate mutase -
  EB818_RS06005 (EB818_06015) - 1170424..1171359 (+) 936 WP_023610138.1 dihydroorotate oxidase -
  EB818_RS06010 (EB818_06020) - 1171659..1173521 (-) 1863 WP_076639304.1 heavy metal translocating P-type ATPase -
  EB818_RS06015 (EB818_06025) prx 1174053..1174235 (-) 183 WP_129322727.1 Paratox Regulator
  EB818_RS06020 (EB818_06030) mf2 1174475..1175233 (+) 759 WP_011184727.1 DNase Mf2 -
  EB818_RS06025 (EB818_06035) speC 1175344..1176051 (+) 708 WP_002985327.1 streptococcal pyrogenic exotoxin SpeC -
  EB818_RS06030 (EB818_06040) - 1176127..1176315 (-) 189 WP_129322728.1 hypothetical protein -
  EB818_RS06035 (EB818_06045) - 1176318..1176746 (-) 429 WP_115219682.1 DUF1617 family protein -
  EB818_RS06040 (EB818_06050) - 1176758..1178644 (-) 1887 WP_129322729.1 gp58-like family protein -
  EB818_RS06045 (EB818_06055) - 1178655..1178969 (-) 315 WP_021340983.1 hypothetical protein -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6959.93 Da        Isoelectric Point: 4.1954

>NTDB_id=282998 EB818_RS06015 WP_129322727.1 1174053..1174235(-) (prx) [Streptococcus pyogenes strain TSPY208]
MLTYDEFKQAIDNGYITGDTVIIVRKNGQIFDYVLPGEKVRPWEVVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=282998 EB818_RS06015 WP_129322727.1 1174053..1174235(-) (prx) [Streptococcus pyogenes strain TSPY208]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGACAACGGATATATCACAGGAGACACAGTAATAATCGTGCGCAAAAA
CGGACAGATTTTTGATTATGTGTTGCCTGGTGAGAAAGTCAGACCATGGGAGGTTGTGACAGACGAAAAAGTGGAAGAGG
TGCTAGTGGAGCTTTCGAGATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

86.667

100

0.867

  prx Streptococcus pyogenes MGAS315

85

100

0.85

  prx Streptococcus pyogenes MGAS315

80

100

0.8

  prx Streptococcus pyogenes MGAS315

75

100

0.75

  prx Streptococcus pyogenes MGAS315

95.238

70

0.667

  prx Streptococcus pyogenes MGAS315

85.366

68.333

0.583

  prx Streptococcus pyogenes MGAS315

80.488

68.333

0.55


Multiple sequence alignment