Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   C7M23_RS19790 Genome accession   NZ_CP028209
Coordinates   3851062..3851856 (-) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain SRCM102745     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3846062..3856856
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M23_RS19755 (C7M23_03887) ephM 3846904..3847764 (-) 861 WP_014479220.1 epoxide hydrolase EphM -
  C7M23_RS19760 (C7M23_03888) spdL 3847766..3848083 (-) 318 WP_038428649.1 SdpC immunity protein SpdL -
  C7M23_RS19765 (C7M23_03889) yfhK 3848168..3848686 (-) 519 WP_029317456.1 SH3 domain-containing protein -
  C7M23_RS19770 (C7M23_03890) yfhJ 3848831..3849100 (-) 270 WP_003243789.1 YfhJ family protein -
  C7M23_RS19775 (C7M23_03891) sspK 3849225..3849377 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  C7M23_RS19780 (C7M23_03892) yfhI 3849410..3850603 (-) 1194 WP_003243500.1 MFS transporter -
  C7M23_RS19785 (C7M23_03894) yfhH 3850746..3851060 (-) 315 WP_003244592.1 YfhH family protein -
  C7M23_RS19790 (C7M23_03895) recX 3851062..3851856 (-) 795 WP_003243354.1 recombination regulator RecX Regulator
  C7M23_RS19795 (C7M23_03896) yfhF 3851945..3852856 (+) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  C7M23_RS19800 (C7M23_03897) yfhE 3852911..3853021 (+) 111 WP_003223230.1 YfhE family protein -
  C7M23_RS19805 (C7M23_03898) yfhD 3853088..3853279 (+) 192 WP_003233561.1 YfhD family protein -
  C7M23_RS19810 (C7M23_03899) yfhC 3853318..3853902 (-) 585 WP_003243940.1 nitroreductase -
  C7M23_RS19815 (C7M23_03900) yfhB 3853990..3854871 (-) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  C7M23_RS19820 (C7M23_03901) sxzA 3854986..3856017 (-) 1032 WP_003243057.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=282914 C7M23_RS19790 WP_003243354.1 3851062..3851856(-) (recX) [Bacillus subtilis strain SRCM102745]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=282914 C7M23_RS19790 WP_003243354.1 3851062..3851856(-) (recX) [Bacillus subtilis strain SRCM102745]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment