Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   C7M23_RS18150 Genome accession   NZ_CP028209
Coordinates   3546460..3547581 (-) Length   373 a.a.
NCBI ID   WP_003232938.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102745     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 3541460..3552581
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M23_RS18125 (C7M23_03571) cwlQ 3541598..3542332 (+) 735 WP_250622474.1 bifunctional muramidase/murein lytic transglycosylase -
  C7M23_RS18130 (C7M23_03572) bhbI 3542588..3542986 (+) 399 WP_131227313.1 thiol management oxidoreductase -
  C7M23_RS18135 (C7M23_03573) spxH 3542983..3543882 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  C7M23_RS18140 (C7M23_03575) - 3544196..3544363 (+) 168 WP_003244944.1 hypothetical protein -
  C7M23_RS18145 (C7M23_03576) pepF 3544401..3546230 (-) 1830 WP_201757451.1 oligoendopeptidase F -
  C7M23_RS18150 (C7M23_03577) coiA 3546460..3547581 (-) 1122 WP_003232938.1 competence protein CoiA Machinery gene
  C7M23_RS18155 - 3547655..3547777 (+) 123 WP_128473814.1 hypothetical protein -
  C7M23_RS18160 (C7M23_03578) mecA 3547772..3548428 (-) 657 WP_003232942.1 adaptor protein MecA Regulator
  C7M23_RS18165 - 3548395..3548535 (-) 141 WP_119122854.1 hypothetical protein -
  C7M23_RS18170 (C7M23_03579) yjbE 3548705..3549361 (+) 657 WP_003232944.1 TerC family protein -
  C7M23_RS18175 (C7M23_03580) spx 3549404..3549799 (-) 396 WP_014476435.1 transcriptional regulator Spx -
  C7M23_RS18180 (C7M23_03581) yjbC 3549980..3550558 (-) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  C7M23_RS18185 (C7M23_03582) yjbB 3550721..3551938 (-) 1218 WP_131227311.1 MFS transporter -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43735.78 Da        Isoelectric Point: 10.1187

>NTDB_id=282901 C7M23_RS18150 WP_003232938.1 3546460..3547581(-) (coiA) [Bacillus subtilis strain SRCM102745]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKETNRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=282901 C7M23_RS18150 WP_003232938.1 3546460..3547581(-) (coiA) [Bacillus subtilis strain SRCM102745]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTTGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCTCCATAGACATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACGCAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGTGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAATTCAAAGGAAACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAGCGGCAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGGTAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTTCGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCAATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

99.196

100

0.992


Multiple sequence alignment