Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   C7M23_RS16815 Genome accession   NZ_CP028209
Coordinates   3303298..3303762 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain SRCM102745     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3298298..3308762
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M23_RS16795 (C7M23_03302) fadH 3299486..3300250 (-) 765 WP_131227372.1 2,4-dienoyl-CoA reductase -
  C7M23_RS16800 (C7M23_03303) ppeE 3300393..3301253 (+) 861 WP_131227371.1 metallophosphoesterase -
  C7M23_RS16805 (C7M23_03304) ltdD 3301310..3301804 (+) 495 WP_010886500.1 L,D-transpeptidase family protein -
  C7M23_RS16810 (C7M23_03305) ykuC 3301880..3303172 (+) 1293 WP_003245267.1 MFS transporter -
  C7M23_RS16815 (C7M23_03306) kre 3303298..3303762 (+) 465 WP_003232406.1 YkyB family protein Regulator
  C7M23_RS16820 (C7M23_03307) cheV 3303806..3304717 (-) 912 WP_014476655.1 chemotaxis protein CheV -
  C7M23_RS16825 (C7M23_03308) - 3304921..3305082 (+) 162 WP_003245246.1 hypothetical protein -
  C7M23_RS16830 (C7M23_03309) dapX 3305284..3306465 (+) 1182 WP_014479654.1 aminotransferase A -
  C7M23_RS16835 (C7M23_03310) kinA 3306476..3308296 (-) 1821 WP_080529263.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=282897 C7M23_RS16815 WP_003232406.1 3303298..3303762(+) (kre) [Bacillus subtilis strain SRCM102745]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=282897 C7M23_RS16815 WP_003232406.1 3303298..3303762(+) (kre) [Bacillus subtilis strain SRCM102745]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment