Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   C7M23_RS16705 Genome accession   NZ_CP028209
Coordinates   3283958..3284533 (-) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102745     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3278958..3289533
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M23_RS16680 (C7M23_03279) mobB 3279354..3279875 (-) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  C7M23_RS16685 (C7M23_03280) glp 3279836..3281128 (-) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  C7M23_RS16690 (C7M23_03281) moeB 3281146..3282165 (-) 1020 WP_044052540.1 molybdopterin-synthase adenylyltransferase MoeB -
  C7M23_RS16695 (C7M23_03282) mobA 3282216..3282815 (-) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  C7M23_RS16700 (C7M23_03283) cse15 3282952..3283917 (+) 966 WP_041335771.1 spore protein Cse15 -
  C7M23_RS16705 (C7M23_03284) rok 3283958..3284533 (-) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  C7M23_RS16710 (C7M23_03285) ykuV 3284999..3285445 (-) 447 WP_003245810.1 thiol-disulfide oxidoreductase YkuV -
  C7M23_RS16715 (C7M23_03286) ahpA 3285517..3286059 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  C7M23_RS16720 (C7M23_03287) mscT 3286296..3287099 (+) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  C7M23_RS16725 (C7M23_03288) ykuS 3287136..3287381 (-) 246 WP_003232382.1 YkuS family protein -
  C7M23_RS16730 (C7M23_03289) dapI 3287443..3288567 (-) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  C7M23_RS16735 (C7M23_03290) dapD 3288637..3289347 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=282896 C7M23_RS16705 WP_003232378.1 3283958..3284533(-) (rok) [Bacillus subtilis strain SRCM102745]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=282896 C7M23_RS16705 WP_003232378.1 3283958..3284533(-) (rok) [Bacillus subtilis strain SRCM102745]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment