Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | C7M23_RS11505 | Genome accession | NZ_CP028209 |
| Coordinates | 2213724..2214134 (+) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis strain SRCM102745 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2197196..2218768 | 2213724..2214134 | within | 0 |
Gene organization within MGE regions
Location: 2197196..2218768
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M23_RS11370 (C7M23_02229) | - | 2197462..2197611 (+) | 150 | WP_076458162.1 | hypothetical protein | - |
| C7M23_RS21370 | - | 2197903..2198126 (+) | 224 | Protein_2199 | RusA family crossover junction endodeoxyribonuclease | - |
| C7M23_RS11380 | yqaO | 2198210..2198416 (+) | 207 | Protein_2200 | XtrA/YqaO family protein | - |
| C7M23_RS21055 | - | 2198488..2198671 (+) | 184 | Protein_2201 | hypothetical protein | - |
| C7M23_RS11385 (C7M23_02230) | - | 2198776..2199042 (-) | 267 | WP_029318115.1 | hypothetical protein | - |
| C7M23_RS21060 (C7M23_02231) | - | 2199190..2199345 (+) | 156 | WP_214285396.1 | hypothetical protein | - |
| C7M23_RS11390 | yqaQ | 2199339..2199748 (+) | 410 | Protein_2204 | sigma-70 family RNA polymerase sigma factor | - |
| C7M23_RS11395 (C7M23_02233) | cotD | 2200306..2200521 (+) | 216 | WP_076458314.1 | spore coat protein CotD | - |
| C7M23_RS11400 (C7M23_02234) | - | 2200708..2200800 (-) | 93 | WP_029318114.1 | YjcZ family sporulation protein | - |
| C7M23_RS11405 | - | 2200840..2200926 (-) | 87 | WP_073991391.1 | YjcZ family sporulation protein | - |
| C7M23_RS11410 (C7M23_02235) | terS | 2201109..2201880 (+) | 772 | Protein_2208 | phage terminase small subunit | - |
| C7M23_RS11415 (C7M23_02236) | - | 2201877..2202062 (+) | 186 | Protein_2209 | phage terminase large subunit | - |
| C7M23_RS11420 | - | 2202089..2202229 (+) | 141 | Protein_2210 | phage holin family protein | - |
| C7M23_RS11425 (C7M23_02237) | - | 2202274..2203248 (+) | 975 | WP_131227653.1 | N-acetylmuramoyl-L-alanine amidase | - |
| C7M23_RS21180 (C7M23_02238) | - | 2203382..2204374 (+) | 993 | WP_250622469.1 | HNH endonuclease signature motif containing protein | - |
| C7M23_RS11440 (C7M23_02239) | - | 2204394..2204939 (+) | 546 | WP_069322772.1 | SMI1/KNR4 family protein | - |
| C7M23_RS11445 (C7M23_02240) | - | 2205133..2205573 (-) | 441 | WP_131227651.1 | SMI1/KNR4 family protein | - |
| C7M23_RS11450 (C7M23_02241) | - | 2205589..2207424 (-) | 1836 | WP_131227649.1 | T7SS effector LXG polymorphic toxin | - |
| C7M23_RS11455 | - | 2207792..2207951 (-) | 160 | Protein_2216 | hypothetical protein | - |
| C7M23_RS11460 (C7M23_02243) | phrE | 2208061..2208195 (-) | 135 | WP_014114495.1 | phosphatase RapE inhibitor PhrE | - |
| C7M23_RS11465 (C7M23_02244) | rapE | 2208185..2209312 (-) | 1128 | WP_131227647.1 | response regulator aspartate phosphatase RapE | - |
| C7M23_RS11470 | - | 2209809..2209939 (-) | 131 | Protein_2219 | DUF255 domain-containing protein | - |
| C7M23_RS11475 (C7M23_02245) | - | 2210221..2211216 (-) | 996 | WP_029318099.1 | acryloyl-CoA reductase | - |
| C7M23_RS11480 (C7M23_02246) | - | 2211374..2211967 (+) | 594 | WP_029318098.1 | TetR/AcrR family transcriptional regulator | - |
| C7M23_RS11485 | - | 2212400..2212564 (+) | 165 | WP_080265384.1 | hypothetical protein | - |
| C7M23_RS11490 | - | 2212522..2212718 (+) | 197 | Protein_2223 | recombinase family protein | - |
| C7M23_RS11495 | - | 2212684..2212800 (-) | 117 | WP_122894874.1 | hypothetical protein | - |
| C7M23_RS11500 (C7M23_02247) | sigK | 2212800..2213528 (-) | 729 | WP_013308023.1 | RNA polymerase sporulation sigma factor SigK | - |
| C7M23_RS11505 (C7M23_02248) | nucA/comI | 2213724..2214134 (+) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| C7M23_RS11510 (C7M23_02249) | yqeB | 2214167..2214889 (-) | 723 | WP_010886572.1 | hypothetical protein | - |
| C7M23_RS11515 (C7M23_02250) | gnd | 2215141..2216034 (+) | 894 | WP_131227645.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| C7M23_RS11520 (C7M23_02251) | yqeD | 2216053..2216679 (-) | 627 | WP_003229962.1 | TVP38/TMEM64 family protein | - |
| C7M23_RS11525 (C7M23_02252) | cwlH | 2216866..2217618 (+) | 753 | WP_003229963.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| C7M23_RS11530 (C7M23_02253) | yqeF | 2217870..2218601 (+) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=282873 C7M23_RS11505 WP_009967785.1 2213724..2214134(+) (nucA/comI) [Bacillus subtilis strain SRCM102745]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=282873 C7M23_RS11505 WP_009967785.1 2213724..2214134(+) (nucA/comI) [Bacillus subtilis strain SRCM102745]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGGGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGTGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTACCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAA
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGGGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGTGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTACCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |