Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | C7M23_RS03225 | Genome accession | NZ_CP028209 |
| Coordinates | 618868..619158 (+) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain SRCM102745 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 613868..624158
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M23_RS03210 (C7M23_00633) | yabE | 614063..615376 (-) | 1314 | WP_015715099.1 | ubiquitin-like domain-containing protein | - |
| C7M23_RS03215 (C7M23_00634) | dayD | 615532..616299 (-) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| C7M23_RS03220 (C7M23_00635) | metG | 616379..618373 (-) | 1995 | WP_003226758.1 | methionine--tRNA ligase | - |
| C7M23_RS03225 (C7M23_00636) | abrB | 618868..619158 (+) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| C7M23_RS03230 (C7M23_00637) | rsmI | 619207..620085 (-) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| C7M23_RS03235 (C7M23_00638) | yazA | 620060..620359 (-) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| C7M23_RS03240 (C7M23_00639) | trmNF | 620346..621089 (-) | 744 | WP_003226765.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| C7M23_RS03245 (C7M23_00640) | yabA | 621148..621507 (-) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| C7M23_RS03250 (C7M23_00641) | ricT | 621522..622349 (-) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| C7M23_RS03255 (C7M23_00642) | holB | 622352..623341 (-) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| C7M23_RS03260 (C7M23_00643) | yaaR | 623353..623793 (-) | 441 | WP_009966249.1 | YaaR family protein | - |
| C7M23_RS03265 (C7M23_00644) | darA | 623806..624135 (-) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=282845 C7M23_RS03225 WP_003226760.1 618868..619158(+) (abrB) [Bacillus subtilis strain SRCM102745]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=282845 C7M23_RS03225 WP_003226760.1 618868..619158(+) (abrB) [Bacillus subtilis strain SRCM102745]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |