Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   C7M23_RS01480 Genome accession   NZ_CP028209
Coordinates   292661..293059 (+) Length   132 a.a.
NCBI ID   WP_029317188.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102745     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 287661..298059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M23_RS01455 (C7M23_00290) hxlR 288395..288757 (-) 363 WP_003246265.1 transcriptional activator HxlR -
  C7M23_RS01460 (C7M23_00291) hxlA 288990..289622 (+) 633 WP_131227103.1 3-hexulose-6-phosphate synthase -
  C7M23_RS01465 (C7M23_00292) hxlB 289628..290185 (+) 558 WP_131227102.1 6-phospho-3-hexuloisomerase -
  C7M23_RS01470 (C7M23_00293) tlpC 290296..292017 (+) 1722 WP_160243140.1 methyl-accepting chemotaxis protein TlpC -
  C7M23_RS01475 (C7M23_00294) nucA/comI 292185..292634 (+) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  C7M23_RS01480 (C7M23_00295) nin/comJ 292661..293059 (+) 399 WP_029317188.1 DNA-entry nuclease inhibitor Regulator
  C7M23_RS01485 (C7M23_00296) bglC 293096..294529 (-) 1434 WP_029317189.1 6-phospho-beta-glucosidase -
  C7M23_RS01490 (C7M23_00297) yckD 294683..295015 (-) 333 WP_015252849.1 YckD family protein -
  C7M23_RS01495 (C7M23_00298) yckC 295097..295552 (-) 456 WP_160243142.1 RDD family protein -
  C7M23_RS01500 - 295571..295768 (-) 198 WP_160243144.1 hypothetical protein -
  C7M23_RS01505 (C7M23_00300) yckB 295929..296792 (+) 864 WP_160243146.1 transporter substrate-binding domain-containing protein -
  C7M23_RS01510 (C7M23_00301) yckA 296802..297482 (+) 681 WP_003234624.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14951.95 Da        Isoelectric Point: 4.8991

>NTDB_id=282841 C7M23_RS01480 WP_029317188.1 292661..293059(+) (nin/comJ) [Bacillus subtilis strain SRCM102745]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVSSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVLAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=282841 C7M23_RS01480 WP_029317188.1 292661..293059(+) (nin/comJ) [Bacillus subtilis strain SRCM102745]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAGCTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCTGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

97.727

100

0.977

Multiple sequence alignment