Detailed information NTG0282794

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: C7M22_RS09040
• Genome accession: NZ_CP028208
• Coordinates: 1790680..1791828 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SRCM102744
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1785680..1796828

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M22_RS09020 (C7M22_01811)	-	1786077..1786760 (-)	684	WP_025284225.1	ABC transporter ATP-binding protein	-
C7M22_RS09025 (C7M22_01812)	-	1786775..1788211 (-)	1437	WP_160222846.1	ABC transporter permease	-
C7M22_RS09030 (C7M22_01813)	-	1788424..1789107 (+)	684	WP_007410267.1	response regulator transcription factor	-
C7M22_RS09035 (C7M22_01814)	-	1789094..1790527 (+)	1434	WP_162992601.1	sensor histidine kinase	-
C7M22_RS09040 (C7M22_01815)	rapC	1790680..1791828 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
C7M22_RS09045 (C7M22_01816)	phrC	1791812..1791931 (+)	120	WP_033575081.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
C7M22_RS09050	-	1792080..1792190 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
C7M22_RS09055 (C7M22_01818)	-	1792270..1793634 (-)	1365	WP_059366589.1	aspartate kinase	-
C7M22_RS09060 (C7M22_01819)	ceuB	1794049..1795002 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
C7M22_RS09065 (C7M22_01820)	-	1794992..1795939 (+)	948	WP_160222847.1	iron chelate uptake ABC transporter family permease subunit	-
C7M22_RS09070 (C7M22_01821)	-	1795933..1796691 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=282794 C7M22_RS09040 WP_007410270.1 1790680..1791828(+) (rapC) [Bacillus velezensis strain SRCM102744]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=282794 C7M22_RS09040 WP_007410270.1 1790680..1791828(+) (rapC) [Bacillus velezensis strain SRCM102744]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCATACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGTGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568