Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | C7M22_RS07345 | Genome accession | NZ_CP028208 |
| Coordinates | 1445838..1446128 (-) | Length | 96 a.a. |
| NCBI ID | WP_169510469.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain SRCM102744 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1440838..1451128
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M22_RS07305 (C7M22_01469) | darA | 1440855..1441184 (+) | 330 | WP_004264734.1 | cyclic di-AMP receptor DarA | - |
| C7M22_RS07310 (C7M22_01470) | - | 1441197..1441637 (+) | 441 | WP_004264730.1 | YaaR family protein | - |
| C7M22_RS07315 (C7M22_01471) | holB | 1441649..1442638 (+) | 990 | WP_007409919.1 | DNA polymerase III subunit delta' | - |
| C7M22_RS07320 (C7M22_01472) | ricT | 1442641..1443468 (+) | 828 | WP_004264723.1 | competence/sporulation regulator complex protein RicT | - |
| C7M22_RS07325 (C7M22_01473) | yabA | 1443483..1443842 (+) | 360 | WP_004264720.1 | replication initiation-control protein YabA | - |
| C7M22_RS07330 (C7M22_01474) | - | 1443903..1444646 (+) | 744 | WP_004264717.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| C7M22_RS07335 (C7M22_01475) | - | 1444633..1444932 (+) | 300 | WP_007409921.1 | GIY-YIG nuclease family protein | - |
| C7M22_RS07340 (C7M22_01476) | rsmI | 1444907..1445788 (+) | 882 | WP_160222794.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| C7M22_RS07345 (C7M22_01477) | abrB | 1445838..1446128 (-) | 291 | WP_169510469.1 | transition state genes transcriptional regulator AbrB | Regulator |
| C7M22_RS07350 (C7M22_01478) | metG | 1446612..1448603 (+) | 1992 | WP_011996169.1 | methionine--tRNA ligase | - |
| C7M22_RS07355 (C7M22_01479) | - | 1448679..1449446 (+) | 768 | WP_025284081.1 | TatD family hydrolase | - |
| C7M22_RS07360 (C7M22_01480) | - | 1449581..1450906 (+) | 1326 | WP_023356663.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10753.57 Da Isoelectric Point: 6.3482
>NTDB_id=282788 C7M22_RS07345 WP_169510469.1 1445838..1446128(-) (abrB) [Bacillus velezensis strain SRCM102744]
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
Nucleotide
Download Length: 291 bp
>NTDB_id=282788 C7M22_RS07345 WP_169510469.1 1445838..1446128(-) (abrB) [Bacillus velezensis strain SRCM102744]
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
97.917 |
100 |
0.979 |