Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   D9Y32_RS21585 Genome accession   NZ_CP033218
Coordinates   4129152..4130879 (+) Length   575 a.a.
NCBI ID   WP_016885410.1    Uniprot ID   -
Organism   Bacillus licheniformis strain TCCC 11148     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 4124152..4135879
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9Y32_RS21565 (D9Y32_21590) - 4124641..4124853 (+) 213 WP_016885413.1 hypothetical protein -
  D9Y32_RS21570 (D9Y32_21595) - 4124909..4126837 (-) 1929 WP_061576758.1 di-heme oxidoredictase family protein -
  D9Y32_RS21575 (D9Y32_21600) - 4126968..4128542 (+) 1575 WP_142782758.1 alkaline phosphatase family protein -
  D9Y32_RS21580 (D9Y32_21605) - 4128682..4129155 (+) 474 WP_009328118.1 MarR family winged helix-turn-helix transcriptional regulator -
  D9Y32_RS21585 (D9Y32_21610) rcrP 4129152..4130879 (+) 1728 WP_016885410.1 ABC transporter ATP-binding protein Regulator
  D9Y32_RS21590 (D9Y32_21615) rcrQ 4130876..4132699 (+) 1824 WP_061565883.1 ABC transporter ATP-binding protein Regulator
  D9Y32_RS21595 (D9Y32_21620) - 4132934..4134148 (+) 1215 WP_003182494.1 cytochrome P450 -
  D9Y32_RS21600 (D9Y32_21625) - 4134197..4134913 (-) 717 WP_003182496.1 3-ketoacyl-ACP reductase -

Sequence

Protein


Download         Length: 575 a.a.        Molecular weight: 63389.38 Da        Isoelectric Point: 9.3980

>NTDB_id=282787 D9Y32_RS21585 WP_016885410.1 4129152..4130879(+) (rcrP) [Bacillus licheniformis strain TCCC 11148]
MISLLKYLKPYKLQVILVAVFTLLSSVLELYLPTLMADVVDVGIVNSDMPFILKTGGWMIACSLLAIMMTVGKAFFASKT
ALGFGRDIRRKLFVKVEHHSMDEFGKIGSASLITRTTNDVKQVQDVLNMMLSLMTRAPLMLVGGIVLAVSRDAKLSIIFL
AALPILAGLIFLITRKAVPLFGVLQKKTDRLNLVLREGLTGVRVIRAFNRVDQEKVRFQKANEEFRDTGIAVNRIMAFLF
PVMMIMMNFTNIAIIWFGGIRIDQGSMQVGNLMAFLQYASMILIALIMLAMTFVMIPRAQASAGRINEVLLTEPSITDPK
EPQKDSGLRGYVEFQNVTFRYAGAEKPVLEDISFKAKPGETTAIIGSTGAGKTTILQLIPRFFDIEKGTVLVNGTDVRKM
AQKELRAKIGYVPQKASIFSGTIKDNIRFGKEDATDEEILEALETAQAAEFVEGKENGIESEIEQAGANLSGGQKQRLSI
ARALVRKPEIYLFDDSFSALDYKTDQKLRKALKKTTADDAVIIVAQRVSTITDADQIIVLNEGKIAGIGTHQQLLAENGI
YQEIVASQQAEEESA

Nucleotide


Download         Length: 1728 bp        

>NTDB_id=282787 D9Y32_RS21585 WP_016885410.1 4129152..4130879(+) (rcrP) [Bacillus licheniformis strain TCCC 11148]
ATGATCTCACTCTTAAAATATTTAAAGCCCTATAAGCTGCAAGTGATTCTCGTCGCTGTTTTTACTTTGCTGAGCAGTGT
GCTTGAGCTTTATTTGCCGACGTTGATGGCTGATGTCGTTGATGTCGGAATCGTAAACAGTGATATGCCATTTATTTTGA
AAACCGGCGGCTGGATGATCGCCTGCTCCCTTCTGGCCATCATGATGACTGTCGGAAAAGCGTTTTTCGCTTCGAAAACA
GCCCTCGGCTTTGGAAGAGATATCAGGCGCAAGCTGTTTGTCAAAGTTGAACACCATTCAATGGATGAATTCGGAAAAAT
CGGTTCTGCTTCTCTCATTACCCGTACCACCAATGATGTCAAGCAGGTCCAAGATGTGCTCAACATGATGCTTTCATTGA
TGACGAGAGCGCCGTTAATGCTGGTCGGCGGTATTGTGCTTGCGGTTTCCAGAGATGCCAAGCTGTCGATTATATTTCTG
GCCGCTCTCCCGATACTTGCAGGGCTGATTTTTCTCATTACAAGAAAAGCTGTCCCCTTATTCGGCGTCCTGCAAAAAAA
GACGGATCGTCTCAACCTTGTTCTCAGGGAAGGTTTGACGGGCGTTCGTGTCATTCGCGCGTTTAACCGCGTTGATCAAG
AAAAAGTCCGGTTTCAAAAAGCGAACGAAGAATTTCGCGATACAGGCATCGCCGTCAACAGAATCATGGCTTTTCTATTC
CCTGTCATGATGATTATGATGAATTTCACGAACATCGCGATTATCTGGTTCGGAGGCATCCGCATCGATCAAGGCAGCAT
GCAGGTCGGGAACTTAATGGCTTTCCTTCAATATGCATCGATGATTCTAATTGCGCTGATCATGCTTGCGATGACATTCG
TGATGATCCCAAGGGCTCAGGCATCTGCCGGCCGCATTAATGAAGTGCTGTTAACAGAGCCTTCGATTACCGATCCGAAA
GAGCCGCAGAAAGACAGCGGCTTGCGCGGTTATGTTGAGTTTCAGAATGTGACTTTTCGTTATGCCGGGGCCGAAAAGCC
CGTTCTCGAAGATATCTCGTTCAAGGCAAAGCCGGGTGAGACGACTGCGATCATCGGCAGCACAGGAGCGGGAAAAACGA
CGATTCTTCAATTGATCCCGAGATTTTTCGATATTGAAAAAGGAACTGTGCTAGTCAACGGAACAGATGTCAGAAAGATG
GCGCAAAAGGAGCTTCGCGCGAAAATCGGCTATGTCCCGCAAAAAGCTTCAATATTCAGCGGGACGATTAAAGACAATAT
CCGCTTTGGCAAAGAAGATGCAACAGATGAAGAAATTTTGGAAGCACTTGAAACGGCACAGGCTGCCGAGTTTGTAGAAG
GCAAGGAAAACGGAATTGAATCTGAAATCGAGCAGGCCGGAGCCAATCTTTCAGGCGGCCAGAAACAGCGGCTTTCCATC
GCCAGGGCATTAGTCAGAAAACCGGAAATTTATTTATTTGACGACAGCTTTTCGGCGCTTGATTACAAAACGGATCAAAA
GCTGAGAAAAGCGCTGAAGAAAACAACCGCTGATGACGCCGTCATCATCGTTGCCCAAAGGGTAAGCACGATTACGGATG
CGGATCAAATCATCGTTTTAAATGAAGGAAAAATAGCCGGCATCGGCACTCATCAACAATTGCTTGCTGAAAACGGCATT
TACCAGGAAATCGTCGCATCACAGCAGGCTGAGGAGGAAAGCGCATGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(15-283)

ABC transporter (ABC_tran)

(349-496)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.886

100

0.417