Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | C7M21_RS10885 | Genome accession | NZ_CP028207 |
| Coordinates | 2123621..2123887 (+) | Length | 88 a.a. |
| NCBI ID | WP_042635730.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain SRCM102743 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2118621..2128887
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M21_RS10865 (C7M21_02175) | - | 2118886..2120187 (-) | 1302 | WP_012117986.1 | hemolysin family protein | - |
| C7M21_RS10870 (C7M21_02176) | - | 2120333..2121283 (+) | 951 | WP_160223176.1 | magnesium transporter CorA family protein | - |
| C7M21_RS10875 (C7M21_02177) | comGA | 2121480..2122550 (+) | 1071 | WP_043020785.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| C7M21_RS10880 (C7M21_02178) | comGB | 2122537..2123574 (+) | 1038 | WP_061582071.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| C7M21_RS10885 (C7M21_02179) | comGC | 2123621..2123887 (+) | 267 | WP_042635730.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| C7M21_RS10890 (C7M21_02180) | comGD | 2123877..2124314 (+) | 438 | WP_012117983.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| C7M21_RS10895 (C7M21_02181) | comGE | 2124298..2124612 (+) | 315 | WP_012117982.1 | competence type IV pilus minor pilin ComGE | - |
| C7M21_RS10900 (C7M21_02182) | comGF | 2124521..2125021 (+) | 501 | WP_257474763.1 | competence type IV pilus minor pilin ComGF | - |
| C7M21_RS10905 (C7M21_02183) | comGG | 2125022..2125399 (+) | 378 | WP_160223175.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| C7M21_RS10910 (C7M21_02184) | - | 2125456..2125635 (+) | 180 | WP_160223174.1 | YqzE family protein | - |
| C7M21_RS10915 (C7M21_02185) | - | 2125675..2126004 (-) | 330 | WP_012117979.1 | DUF3889 domain-containing protein | - |
| C7M21_RS10920 (C7M21_02186) | tapA | 2126263..2126934 (+) | 672 | WP_160223173.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C7M21_RS10925 (C7M21_02187) | sipW | 2126906..2127490 (+) | 585 | WP_160223172.1 | signal peptidase I SipW | - |
| C7M21_RS10930 (C7M21_02188) | tasA | 2127555..2128340 (+) | 786 | WP_007408329.1 | biofilm matrix protein TasA | - |
| C7M21_RS10935 (C7M21_02189) | sinR | 2128388..2128723 (-) | 336 | WP_003153104.1 | transcriptional regulator SinR | Regulator |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 9721.32 Da Isoelectric Point: 6.2027
>NTDB_id=282729 C7M21_RS10885 WP_042635730.1 2123621..2123887(+) (comGC) [Bacillus velezensis strain SRCM102743]
MLIVLFIVSILLLITIPNVTKHNQSIQHKGCEGLQNMVKAQVTAYEIDHEGKMPDMNDLQSEGYIKKNTACPNGKQILIS
GGEVTVEQ
MLIVLFIVSILLLITIPNVTKHNQSIQHKGCEGLQNMVKAQVTAYEIDHEGKMPDMNDLQSEGYIKKNTACPNGKQILIS
GGEVTVEQ
Nucleotide
Download Length: 267 bp
>NTDB_id=282729 C7M21_RS10885 WP_042635730.1 2123621..2123887(+) (comGC) [Bacillus velezensis strain SRCM102743]
ATGCTGATCGTTTTATTTATCGTTTCCATTCTGCTTTTAATCACCATTCCTAACGTTACAAAACATAATCAAAGCATTCA
GCATAAGGGCTGTGAAGGACTGCAGAATATGGTGAAAGCTCAAGTGACGGCGTACGAAATCGACCATGAAGGTAAAATGC
CGGATATGAACGATTTACAATCAGAGGGGTATATCAAAAAAAATACAGCCTGCCCGAATGGTAAACAGATCTTAATTAGT
GGCGGAGAAGTTACAGTTGAACAATAA
ATGCTGATCGTTTTATTTATCGTTTCCATTCTGCTTTTAATCACCATTCCTAACGTTACAAAACATAATCAAAGCATTCA
GCATAAGGGCTGTGAAGGACTGCAGAATATGGTGAAAGCTCAAGTGACGGCGTACGAAATCGACCATGAAGGTAAAATGC
CGGATATGAACGATTTACAATCAGAGGGGTATATCAAAAAAAATACAGCCTGCCCGAATGGTAAACAGATCTTAATTAGT
GGCGGAGAAGTTACAGTTGAACAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
74.648 |
80.682 |
0.602 |