Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   D9Y32_RS06705 Genome accession   NZ_CP033218
Coordinates   1290324..1291172 (+) Length   282 a.a.
NCBI ID   WP_003178034.1    Uniprot ID   Q65CN8
Organism   Bacillus licheniformis strain TCCC 11148     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1285324..1296172
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9Y32_RS06680 (D9Y32_06680) rsmG 1286236..1286955 (+) 720 WP_061576538.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  D9Y32_RS06685 (D9Y32_06685) noc 1287053..1287904 (+) 852 WP_003178042.1 nucleoid occlusion protein -
  D9Y32_RS06690 (D9Y32_06690) - 1287960..1288817 (+) 858 WP_003178040.1 RNA polymerase sigma-70 factor -
  D9Y32_RS06695 (D9Y32_06695) - 1288884..1289327 (+) 444 WP_003178038.1 carboxymuconolactone decarboxylase family protein -
  D9Y32_RS06700 (D9Y32_06700) soj 1289570..1290331 (+) 762 WP_011201786.1 sporulation initiation inhibitor protein Soj -
  D9Y32_RS06705 (D9Y32_06705) spo0J 1290324..1291172 (+) 849 WP_003178034.1 ParB/RepB/Spo0J family partition protein Regulator
  D9Y32_RS06710 (D9Y32_06710) yyaC 1291209..1291826 (-) 618 WP_003178032.1 spore protease YyaC -
  D9Y32_RS06715 (D9Y32_06715) - 1292130..1293143 (+) 1014 WP_142782256.1 hypothetical protein -
  D9Y32_RS06720 (D9Y32_06720) - 1293231..1293437 (+) 207 WP_011201785.1 DUF951 domain-containing protein -
  D9Y32_RS06730 (D9Y32_06730) ychF 1293616..1294716 (+) 1101 WP_003178027.1 redox-regulated ATPase YchF -
  D9Y32_RS06735 (D9Y32_06735) rpsF 1294830..1295117 (+) 288 WP_003178026.1 30S ribosomal protein S6 -
  D9Y32_RS06740 (D9Y32_06740) ssbA 1295164..1295676 (+) 513 WP_003178024.1 single-stranded DNA-binding protein SsbA Machinery gene
  D9Y32_RS06745 (D9Y32_06745) rpsR 1295728..1295967 (+) 240 WP_003178022.1 30S ribosomal protein S18 -

Sequence


Protein


Download         Length: 282 a.a.        Molecular weight: 32283.41 Da        Isoelectric Point: 9.5628

>NTDB_id=282686 D9Y32_RS06705 WP_003178034.1 1290324..1291172(+) (spo0J) [Bacillus licheniformis strain TCCC 11148]
MPKGLGKGINALFSNVDLSEETVEEIKLQDLRPNPYQPRKTFDDQSLKDLKESILQHGVLQPIIVRKSIKGYDIVAGERR
FRAAEKAGLETIPAIVRELSESLMMEIALLENLQREDLSPLEEAKAYESLLKHLDMTQEQLAKRLGKSRPHIANHLRLLT
LPEDVQKLIDNGTLSMGHGRTLLGLKNKKKLEPLVQKVVSEQLNVRQLEKLIQQLNADVPRETKKPKQVKDAVIKERESY
LRNYFGTPVTIKKQKKKGRIEIEFYSNEDLERILELLAQEDA

Nucleotide


Download         Length: 849 bp        

>NTDB_id=282686 D9Y32_RS06705 WP_003178034.1 1290324..1291172(+) (spo0J) [Bacillus licheniformis strain TCCC 11148]
ATGCCTAAAGGTCTCGGAAAAGGGATTAATGCATTGTTTTCAAATGTTGATTTATCCGAAGAAACGGTTGAGGAAATCAA
GCTGCAAGACTTGCGGCCCAACCCTTATCAGCCAAGAAAAACGTTTGATGACCAATCGTTAAAAGATTTGAAGGAGTCCA
TTTTGCAGCACGGTGTTTTGCAGCCCATCATCGTCAGAAAGTCAATTAAAGGCTATGACATTGTGGCCGGAGAACGCCGT
TTCCGGGCTGCTGAAAAGGCCGGATTGGAAACCATTCCTGCGATTGTGCGCGAGCTGTCGGAATCCCTGATGATGGAGAT
TGCCCTATTGGAAAATCTTCAACGAGAAGACCTGTCTCCGCTAGAAGAAGCAAAAGCCTATGAATCTTTGCTCAAACATC
TCGATATGACCCAGGAACAGCTGGCGAAAAGGCTTGGAAAAAGCAGGCCTCACATCGCCAACCACTTGCGGCTGCTGACA
CTTCCTGAAGACGTTCAAAAGTTAATCGACAACGGTACGTTATCGATGGGCCATGGCCGAACATTGCTTGGATTGAAAAA
CAAGAAAAAGCTTGAGCCGCTTGTTCAAAAGGTCGTGTCCGAACAGTTGAACGTCCGCCAGTTGGAAAAGTTAATTCAAC
AGTTGAACGCTGATGTTCCACGTGAAACAAAGAAGCCGAAACAAGTCAAAGATGCAGTGATCAAGGAACGGGAATCGTAT
TTGCGAAACTATTTTGGAACACCGGTGACCATTAAAAAGCAAAAGAAAAAAGGCAGGATCGAAATCGAATTCTACTCAAA
TGAAGACTTGGAGCGTATTCTCGAATTATTGGCTCAAGAAGACGCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q65CN8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

43.462

92.199

0.401