Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   C7M20_RS06955 Genome accession   NZ_CP028206
Coordinates   1347255..1347719 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain SRCM102742     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1342255..1352719
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M20_RS06940 (C7M20_01402) - 1342735..1344555 (+) 1821 WP_021493759.1 PAS domain-containing protein -
  C7M20_RS06945 (C7M20_01403) - 1344536..1345749 (-) 1214 Protein_1333 aminotransferase A -
  C7M20_RS19830 (C7M20_01404) - 1345950..1346111 (-) 162 WP_007409608.1 hypothetical protein -
  C7M20_RS06950 (C7M20_01405) cheV 1346300..1347211 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  C7M20_RS06955 (C7M20_01406) kre 1347255..1347719 (-) 465 WP_003154622.1 YkyB family protein Regulator
  C7M20_RS06960 (C7M20_01407) - 1347842..1349134 (-) 1293 WP_015239757.1 MFS transporter -
  C7M20_RS06965 (C7M20_01408) - 1349210..1349704 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  C7M20_RS06970 (C7M20_01409) - 1349779..1350642 (-) 864 WP_032871355.1 metallophosphoesterase -
  C7M20_RS06975 (C7M20_01410) fadH 1350787..1351551 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  C7M20_RS06980 - 1351716..1352211 (+) 496 Protein_1341 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=282636 C7M20_RS06955 WP_003154622.1 1347255..1347719(-) (kre) [Bacillus velezensis strain SRCM102742]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=282636 C7M20_RS06955 WP_003154622.1 1347255..1347719(-) (kre) [Bacillus velezensis strain SRCM102742]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAGTCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment