Detailed information NTG0282616

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: C7M20_RS01780
• Genome accession: NZ_CP028206
• Coordinates: 357784..358932 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SRCM102742
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 352784..363932

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M20_RS01760 (C7M20_00352)	-	353181..353864 (-)	684	WP_025284225.1	ABC transporter ATP-binding protein	-
C7M20_RS01765 (C7M20_00353)	-	353879..355315 (-)	1437	WP_160222846.1	ABC transporter permease	-
C7M20_RS01770 (C7M20_00354)	-	355528..356211 (+)	684	WP_007410267.1	response regulator transcription factor	-
C7M20_RS01775 (C7M20_00355)	-	356198..357631 (+)	1434	WP_162992601.1	sensor histidine kinase	-
C7M20_RS01780 (C7M20_00356)	rapC	357784..358932 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
C7M20_RS01785 (C7M20_00357)	phrC	358916..359035 (+)	120	WP_033575081.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
C7M20_RS01790	-	359184..359294 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
C7M20_RS01795 (C7M20_00359)	-	359374..360738 (-)	1365	WP_059366589.1	aspartate kinase	-
C7M20_RS01800 (C7M20_00360)	ceuB	361152..362105 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
C7M20_RS01805 (C7M20_00361)	-	362095..363042 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
C7M20_RS01810 (C7M20_00362)	-	363036..363794 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=282616 C7M20_RS01780 WP_007410270.1 357784..358932(+) (rapC) [Bacillus velezensis strain SRCM102742]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=282616 C7M20_RS01780 WP_007410270.1 357784..358932(+) (rapC) [Bacillus velezensis strain SRCM102742]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCATACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGTGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568