Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   C7M19_RS18290 Genome accession   NZ_CP028205
Coordinates   3668396..3668992 (+) Length   198 a.a.
NCBI ID   WP_012117447.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM102741     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3663396..3673992
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M19_RS18260 (C7M19_03693) - 3663609..3664064 (+) 456 WP_007409622.1 flavodoxin -
  C7M19_RS18265 (C7M19_03694) dapD 3664146..3664856 (+) 711 WP_012117443.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  C7M19_RS18270 (C7M19_03695) - 3664927..3666051 (+) 1125 WP_038463797.1 N-acetyldiaminopimelate deacetylase -
  C7M19_RS18275 (C7M19_03696) - 3666112..3666357 (+) 246 WP_003154596.1 YkuS family protein -
  C7M19_RS18280 (C7M19_03697) - 3666391..3667197 (-) 807 WP_038463800.1 mechanosensitive ion channel family protein -
  C7M19_RS18285 (C7M19_03698) - 3667485..3667943 (+) 459 WP_099566709.1 TlpA disulfide reductase family protein -
  C7M19_RS18290 (C7M19_03699) rok 3668396..3668992 (+) 597 WP_012117447.1 transcriptional regulator Rok Regulator
  C7M19_RS18295 (C7M19_03700) - 3669016..3670008 (-) 993 WP_043021218.1 hypothetical protein -
  C7M19_RS18300 (C7M19_03701) - 3670154..3670756 (+) 603 WP_076424045.1 molybdenum cofactor guanylyltransferase -
  C7M19_RS18305 (C7M19_03702) - 3670808..3671827 (+) 1020 WP_007611113.1 molybdopterin-synthase adenylyltransferase MoeB -
  C7M19_RS18310 (C7M19_03703) glp 3671845..3673137 (+) 1293 WP_132106131.1 gephyrin-like molybdotransferase Glp -
  C7M19_RS18315 (C7M19_03704) mobB 3673098..3673619 (+) 522 WP_007409631.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22495.54 Da        Isoelectric Point: 9.6909

>NTDB_id=282604 C7M19_RS18290 WP_012117447.1 3668396..3668992(+) (rok) [Bacillus velezensis strain SRCM102741]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
AQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=282604 C7M19_RS18290 WP_012117447.1 3668396..3668992(+) (rok) [Bacillus velezensis strain SRCM102741]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAGCAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
GCACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTTCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment