Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | C7M19_RS11325 | Genome accession | NZ_CP028205 |
| Coordinates | 2318215..2318505 (-) | Length | 96 a.a. |
| NCBI ID | WP_169510469.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain SRCM102741 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2313215..2323505
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M19_RS11285 (C7M19_02284) | darA | 2313232..2313561 (+) | 330 | WP_004264734.1 | cyclic di-AMP receptor DarA | - |
| C7M19_RS11290 (C7M19_02285) | - | 2313574..2314014 (+) | 441 | WP_004264730.1 | YaaR family protein | - |
| C7M19_RS11295 (C7M19_02286) | holB | 2314026..2315015 (+) | 990 | WP_160223396.1 | DNA polymerase III subunit delta' | - |
| C7M19_RS11300 (C7M19_02287) | ricT | 2315018..2315845 (+) | 828 | WP_004264723.1 | competence/sporulation regulator complex protein RicT | - |
| C7M19_RS11305 (C7M19_02288) | yabA | 2315860..2316219 (+) | 360 | WP_004264720.1 | replication initiation-control protein YabA | - |
| C7M19_RS11310 (C7M19_02289) | - | 2316280..2317023 (+) | 744 | WP_004264717.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| C7M19_RS11315 (C7M19_02290) | - | 2317010..2317309 (+) | 300 | WP_007409921.1 | GIY-YIG nuclease family protein | - |
| C7M19_RS11320 (C7M19_02291) | rsmI | 2317284..2318165 (+) | 882 | WP_043020647.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| C7M19_RS11325 (C7M19_02292) | abrB | 2318215..2318505 (-) | 291 | WP_169510469.1 | transition state genes transcriptional regulator AbrB | Regulator |
| C7M19_RS11330 (C7M19_02293) | metG | 2318989..2320980 (+) | 1992 | WP_011996169.1 | methionine--tRNA ligase | - |
| C7M19_RS11335 (C7M19_02294) | - | 2321056..2321823 (+) | 768 | WP_025284081.1 | TatD family hydrolase | - |
| C7M19_RS11340 (C7M19_02295) | - | 2321958..2323283 (+) | 1326 | WP_023356663.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10753.57 Da Isoelectric Point: 6.3482
>NTDB_id=282577 C7M19_RS11325 WP_169510469.1 2318215..2318505(-) (abrB) [Bacillus velezensis strain SRCM102741]
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
Nucleotide
Download Length: 291 bp
>NTDB_id=282577 C7M19_RS11325 WP_169510469.1 2318215..2318505(-) (abrB) [Bacillus velezensis strain SRCM102741]
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATTATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATTATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
97.917 |
100 |
0.979 |