Detailed information    

insolico Bioinformatically predicted

Overview

Name   sinI   Type   Regulator
Locus tag   C7M19_RS03395 Genome accession   NZ_CP028205
Coordinates   776424..776597 (+) Length   57 a.a.
NCBI ID   WP_003153105.1    Uniprot ID   A7Z6M7
Organism   Bacillus velezensis strain SRCM102741     
Function   inhibit the expression of sinR (predicted from homology)   
Competence regulation

Genomic Context

Location: 771424..781597
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M19_RS03380 (C7M19_00693) gcvT 772237..773337 (-) 1101 WP_032866432.1 glycine cleavage system aminomethyltransferase GcvT -
  C7M19_RS03385 (C7M19_00694) - 773761..775431 (+) 1671 WP_124934996.1 DEAD/DEAH box helicase -
  C7M19_RS03390 (C7M19_00695) - 775453..776247 (+) 795 WP_076424968.1 YqhG family protein -
  C7M19_RS03395 (C7M19_00696) sinI 776424..776597 (+) 174 WP_003153105.1 anti-repressor SinI Regulator
  C7M19_RS03400 (C7M19_00697) sinR 776631..776966 (+) 336 WP_003153104.1 transcriptional regulator SinR Regulator
  C7M19_RS03405 (C7M19_00698) tasA 777014..777799 (-) 786 WP_007408329.1 biofilm matrix protein TasA -
  C7M19_RS03410 (C7M19_00699) sipW 777864..778448 (-) 585 WP_160223172.1 signal peptidase I SipW -
  C7M19_RS03415 (C7M19_00700) tapA 778420..779091 (-) 672 WP_160223173.1 amyloid fiber anchoring/assembly protein TapA -
  C7M19_RS03420 (C7M19_00701) - 779350..779679 (+) 330 WP_012117979.1 DUF3889 domain-containing protein -
  C7M19_RS03425 (C7M19_00702) - 779719..779898 (-) 180 WP_160223174.1 YqzE family protein -
  C7M19_RS03430 (C7M19_00703) comGG 779955..780332 (-) 378 WP_160223175.1 competence type IV pilus minor pilin ComGG Machinery gene
  C7M19_RS03435 (C7M19_00704) comGF 780333..780833 (-) 501 WP_257474763.1 competence type IV pilus minor pilin ComGF -
  C7M19_RS03440 (C7M19_00705) comGE 780742..781056 (-) 315 WP_012117982.1 competence type IV pilus minor pilin ComGE -
  C7M19_RS03445 (C7M19_00706) comGD 781040..781477 (-) 438 WP_012117983.1 competence type IV pilus minor pilin ComGD Machinery gene

Sequence

Protein


Download         Length: 57 a.a.        Molecular weight: 6695.72 Da        Isoelectric Point: 9.8170

>NTDB_id=282538 C7M19_RS03395 WP_003153105.1 776424..776597(+) (sinI) [Bacillus velezensis strain SRCM102741]
MKNAKMEFSQLDKEWVELILEAQKANISLEEIRKYLLSHKKSSQHIQAARSHTVNPF

Nucleotide


Download         Length: 174 bp        

>NTDB_id=282538 C7M19_RS03395 WP_003153105.1 776424..776597(+) (sinI) [Bacillus velezensis strain SRCM102741]
ATGAAAAATGCAAAAATGGAATTTTCGCAATTAGATAAGGAATGGGTTGAGCTGATATTAGAAGCCCAAAAAGCAAATAT
CAGCCTAGAAGAAATACGCAAATACCTGCTTTCGCATAAAAAGTCTTCTCAACATATCCAGGCAGCCAGAAGTCATACCG
TAAATCCTTTCTGA

Domains

Predicted by InterProScan.

Anti-repressor SinI (SinI)

(11-37)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sinI Bacillus subtilis subsp. subtilis str. 168

70.175

100

0.702

Multiple sequence alignment