Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   C7M18_RS09010 Genome accession   NZ_CP028204
Coordinates   1787703..1788101 (-) Length   132 a.a.
NCBI ID   WP_007609299.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM102755     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1782703..1793101
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M18_RS08985 (C7M18_01807) - 1782875..1784077 (+) 1203 WP_160182374.1 GTP-binding protein -
  C7M18_RS08990 (C7M18_01808) - 1784142..1785278 (+) 1137 WP_094296367.1 zinc-dependent alcohol dehydrogenase -
  C7M18_RS08995 (C7M18_01809) - 1785293..1785727 (+) 435 WP_014416871.1 RDD family protein -
  C7M18_RS09000 (C7M18_01810) - 1785844..1786122 (+) 279 WP_263612330.1 YckD family protein -
  C7M18_RS09005 (C7M18_01811) - 1786226..1787662 (+) 1437 WP_072177592.1 glycoside hydrolase family 1 protein -
  C7M18_RS09010 (C7M18_01812) nin/comJ 1787703..1788101 (-) 399 WP_007609299.1 competence protein ComJ Regulator
  C7M18_RS09015 (C7M18_01813) nucA/comI 1788122..1788559 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  C7M18_RS09020 (C7M18_01814) hxlB 1788890..1789447 (-) 558 WP_021494205.1 6-phospho-3-hexuloisomerase -
  C7M18_RS09025 (C7M18_01815) hxlA 1789444..1790079 (-) 636 WP_014416875.1 3-hexulose-6-phosphate synthase -
  C7M18_RS09030 (C7M18_01816) - 1790311..1790673 (+) 363 WP_007409352.1 winged helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14977.03 Da        Isoelectric Point: 4.9712

>NTDB_id=282489 C7M18_RS09010 WP_007609299.1 1787703..1788101(-) (nin/comJ) [Bacillus velezensis strain SRCM102755]
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=282489 C7M18_RS09010 WP_007609299.1 1787703..1788101(-) (nin/comJ) [Bacillus velezensis strain SRCM102755]
TTGATTAAATCATGGAAACCGCAAGAACTAGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCTATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAAGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTCATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75.758

100

0.758

Multiple sequence alignment