Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | C7M18_RS07420 | Genome accession | NZ_CP028204 |
| Coordinates | 1485972..1486262 (-) | Length | 96 a.a. |
| NCBI ID | WP_169510469.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain SRCM102755 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1480972..1491262
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M18_RS07380 (C7M18_01484) | darA | 1480989..1481318 (+) | 330 | WP_004264734.1 | cyclic di-AMP receptor DarA | - |
| C7M18_RS07385 (C7M18_01485) | - | 1481331..1481771 (+) | 441 | WP_160216692.1 | YaaR family protein | - |
| C7M18_RS07390 (C7M18_01486) | holB | 1481783..1482772 (+) | 990 | WP_007409919.1 | DNA polymerase III subunit delta' | - |
| C7M18_RS07395 (C7M18_01487) | ricT | 1482775..1483602 (+) | 828 | WP_004264723.1 | competence/sporulation regulator complex protein RicT | - |
| C7M18_RS07400 (C7M18_01488) | yabA | 1483617..1483976 (+) | 360 | WP_004264720.1 | replication initiation-control protein YabA | - |
| C7M18_RS07405 (C7M18_01489) | - | 1484037..1484780 (+) | 744 | WP_004264717.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| C7M18_RS07410 (C7M18_01490) | - | 1484767..1485066 (+) | 300 | WP_007409921.1 | GIY-YIG nuclease family protein | - |
| C7M18_RS07415 (C7M18_01491) | rsmI | 1485041..1485922 (+) | 882 | WP_022552470.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| C7M18_RS07420 (C7M18_01492) | abrB | 1485972..1486262 (-) | 291 | WP_169510469.1 | transition state genes transcriptional regulator AbrB | Regulator |
| C7M18_RS07425 (C7M18_01493) | metG | 1486745..1488736 (+) | 1992 | WP_022552471.1 | methionine--tRNA ligase | - |
| C7M18_RS07430 (C7M18_01494) | - | 1488813..1489580 (+) | 768 | WP_032864028.1 | TatD family hydrolase | - |
| C7M18_RS07435 (C7M18_01495) | - | 1489715..1491040 (+) | 1326 | WP_023356663.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10753.57 Da Isoelectric Point: 6.3482
>NTDB_id=282485 C7M18_RS07420 WP_169510469.1 1485972..1486262(-) (abrB) [Bacillus velezensis strain SRCM102755]
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
Nucleotide
Download Length: 291 bp
>NTDB_id=282485 C7M18_RS07420 WP_169510469.1 1485972..1486262(-) (abrB) [Bacillus velezensis strain SRCM102755]
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTAGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTAGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
97.917 |
100 |
0.979 |