Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | C7M16_RS11175 | Genome accession | NZ_CP028201 |
| Coordinates | 2237261..2238298 (-) | Length | 345 a.a. |
| NCBI ID | WP_072175548.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM102753 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2232261..2243298
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M16_RS11125 (C7M16_02196) | tasA | 2232358..2233143 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| C7M16_RS11130 (C7M16_02197) | sipW | 2233207..2233779 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| C7M16_RS11135 (C7M16_02198) | tapA | 2233763..2234524 (-) | 762 | WP_160221678.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C7M16_RS11140 (C7M16_02199) | yqzG | 2234796..2235122 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| C7M16_RS11145 (C7M16_02200) | spoIITA | 2235164..2235343 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| C7M16_RS11150 (C7M16_02201) | comGG | 2235415..2235789 (-) | 375 | WP_033884701.1 | ComG operon protein ComGG | Machinery gene |
| C7M16_RS11155 | comGF | 2235790..2236173 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| C7M16_RS11160 (C7M16_02203) | comGE | 2236199..2236546 (-) | 348 | WP_033884703.1 | ComG operon protein 5 | Machinery gene |
| C7M16_RS11165 (C7M16_02204) | comGD | 2236530..2236961 (-) | 432 | WP_015714255.1 | comG operon protein ComGD | Machinery gene |
| C7M16_RS11170 (C7M16_02205) | comGC | 2236951..2237247 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| C7M16_RS11175 (C7M16_02206) | comGB | 2237261..2238298 (-) | 1038 | WP_072175548.1 | comG operon protein ComGB | Machinery gene |
| C7M16_RS11180 (C7M16_02207) | comGA | 2238285..2239355 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| C7M16_RS11185 (C7M16_02209) | - | 2239583..2239765 (-) | 183 | WP_033884706.1 | hypothetical protein | - |
| C7M16_RS11190 (C7M16_02210) | corA | 2239767..2240720 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| C7M16_RS11195 (C7M16_02211) | yqhB | 2240863..2242191 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| C7M16_RS11200 (C7M16_02212) | rsbRD | 2242244..2243080 (-) | 837 | WP_015714260.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39734.16 Da Isoelectric Point: 9.6257
>NTDB_id=282340 C7M16_RS11175 WP_072175548.1 2237261..2238298(-) (comGB) [Bacillus subtilis strain SRCM102753]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=282340 C7M16_RS11175 WP_072175548.1 2237261..2238298(-) (comGB) [Bacillus subtilis strain SRCM102753]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCCCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCCCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.381 |
93.623 |
0.93 |