Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   C7M16_RS05020 Genome accession   NZ_CP028201
Coordinates   995172..995363 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain SRCM102753     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 990172..1000363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M16_RS04990 (C7M16_00980) argF 991036..991995 (+) 960 WP_076457865.1 ornithine carbamoyltransferase -
  C7M16_RS04995 (C7M16_00981) yjzC 992080..992259 (+) 180 WP_003245356.1 YjzC family protein -
  C7M16_RS05000 (C7M16_00982) yjzD 992305..992490 (-) 186 WP_029317607.1 DUF2929 domain-containing protein -
  C7M16_RS05005 (C7M16_00983) - 992741..993475 (+) 735 WP_003245223.1 hypothetical protein -
  C7M16_RS05010 (C7M16_00984) - 993557..994114 (+) 558 WP_029317608.1 hypothetical protein -
  C7M16_RS05015 (C7M16_00985) med 994204..995157 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  C7M16_RS05020 (C7M16_00986) comZ 995172..995363 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  C7M16_RS05025 (C7M16_00987) yjzB 995393..995632 (-) 240 WP_003232972.1 spore coat protein YjzB -
  C7M16_RS05030 (C7M16_00988) fabH 995797..996735 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  C7M16_RS05035 (C7M16_00989) fabF 996758..997999 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  C7M16_RS05040 (C7M16_00990) yjaZ 998075..998860 (+) 786 WP_160221500.1 DUF2268 domain-containing protein -
  C7M16_RS05045 (C7M16_00991) appD 999052..1000038 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=282314 C7M16_RS05020 WP_003224559.1 995172..995363(+) (comZ) [Bacillus subtilis strain SRCM102753]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=282314 C7M16_RS05020 WP_003224559.1 995172..995363(+) (comZ) [Bacillus subtilis strain SRCM102753]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment