Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C9J86_RS04100 Genome accession   NZ_CP028190
Coordinates   748578..749243 (-) Length   221 a.a.
NCBI ID   WP_053865806.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CFSAN018749     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 743578..754243
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9J86_RS04080 (C9J86_04080) - 744031..744144 (-) 114 WP_014937089.1 hypothetical protein -
  C9J86_RS04085 (C9J86_04085) - 744820..746820 (-) 2001 WP_000776744.1 ABC transporter permease -
  C9J86_RS04090 (C9J86_04090) - 746817..747572 (-) 756 WP_000923764.1 ABC transporter ATP-binding protein -
  C9J86_RS04095 (C9J86_04095) braS 747680..748567 (-) 888 WP_053865805.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  C9J86_RS04100 (C9J86_04100) braR 748578..749243 (-) 666 WP_053865806.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  C9J86_RS04105 (C9J86_04105) - 749269..749469 (-) 201 WP_000604727.1 hypothetical protein -
  C9J86_RS04110 (C9J86_04110) - 749667..751091 (+) 1425 WP_000953743.1 alkaline phosphatase -
  C9J86_RS15325 (C9J86_04115) - 751151..751252 (-) 102 WP_000731972.1 SE2200 family small protein -
  C9J86_RS04120 (C9J86_04120) - 751374..751829 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  C9J86_RS04125 (C9J86_04125) - 752074..752835 (-) 762 WP_000323448.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25402.49 Da        Isoelectric Point: 4.7961

>NTDB_id=282196 C9J86_RS04100 WP_053865806.1 748578..749243(-) (braR) [Staphylococcus aureus strain CFSAN018749]
MKILIIEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQSIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=282196 C9J86_RS04100 WP_053865806.1 748578..749243(-) (braR) [Staphylococcus aureus strain CFSAN018749]
ATGAAAATATTAATTATTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAGCCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAGCATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.095

100

0.991

Multiple sequence alignment