Detailed information    

insolico Bioinformatically predicted

Overview


Name   agrA   Type   Regulator
Locus tag   C9J86_RS00835 Genome accession   NZ_CP028190
Coordinates   130899..131615 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain CFSAN018749     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 125899..136615
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9J86_RS00805 (C9J86_00805) - 126111..126737 (+) 627 WP_000522388.1 nitroreductase family protein -
  C9J86_RS00810 (C9J86_00810) - 127098..127883 (+) 786 WP_000867948.1 carbon-nitrogen family hydrolase -
  C9J86_RS15185 hld 128486..128566 (-) 81 WP_000046022.1 delta-hemolysin -
  C9J86_RS00820 (C9J86_00820) - 128856..129419 (+) 564 WP_053865703.1 accessory gene regulator AgrB -
  C9J86_RS00825 (C9J86_00825) agrD 129423..129563 (+) 141 WP_000735197.1 cyclic lactone autoinducer peptide AgrD -
  C9J86_RS00830 (C9J86_00830) agrC 129588..130880 (+) 1293 WP_000387809.1 quorum-sensing sensor histidine kinase AgrC -
  C9J86_RS00835 (C9J86_00835) agrA 130899..131615 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  C9J86_RS00840 (C9J86_00840) - 131989..132948 (-) 960 WP_001253292.1 carbohydrate kinase family protein -
  C9J86_RS00845 (C9J86_00845) - 132945..134429 (-) 1485 WP_001791588.1 sucrose-6-phosphate hydrolase -
  C9J86_RS00850 (C9J86_00850) - 134578..135528 (-) 951 WP_000790325.1 LacI family DNA-binding transcriptional regulator -

Sequence


Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=282191 C9J86_RS00835 WP_000688492.1 130899..131615(+) (agrA) [Staphylococcus aureus strain CFSAN018749]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=282191 C9J86_RS00835 WP_000688492.1 130899..131615(+) (agrA) [Staphylococcus aureus strain CFSAN018749]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATCAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACGTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTAT
TATCAAAAGATAATAGCGTTGAAACGATTGAGTTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTCAGATGTCATAATAGCTTTGTCGTCAATCGTCATAATATCGAATCTATTG
ATTCGAAAGAGCGTATTGTTTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1


Multiple sequence alignment