Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | LPC_RS02045 | Genome accession | NC_009494 |
| Coordinates | 450337..450816 (-) | Length | 159 a.a. |
| NCBI ID | WP_011945554.1 | Uniprot ID | A0A378K2W0 |
| Organism | Legionella pneumophila str. Corby | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 445337..455816
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPC_RS02010 (LPC_2995) | rplO | 445469..445903 (+) | 435 | WP_011945550.1 | 50S ribosomal protein L15 | - |
| LPC_RS02015 (LPC_2994) | secY | 445906..447234 (+) | 1329 | WP_011945551.1 | preprotein translocase subunit SecY | - |
| LPC_RS16160 | rpmJ | 447251..447364 (+) | 114 | WP_010946099.1 | 50S ribosomal protein L36 | - |
| LPC_RS02020 (LPC_2993) | rpsM | 447442..447798 (+) | 357 | WP_010946100.1 | 30S ribosomal protein S13 | - |
| LPC_RS02025 (LPC_2992) | rpsK | 447822..448220 (+) | 399 | WP_011945552.1 | 30S ribosomal protein S11 | - |
| LPC_RS02030 (LPC_2991) | rpsD | 448237..448857 (+) | 621 | WP_010946102.1 | 30S ribosomal protein S4 | - |
| LPC_RS02035 (LPC_2990) | - | 448876..449868 (+) | 993 | WP_011945553.1 | DNA-directed RNA polymerase subunit alpha | - |
| LPC_RS02040 (LPC_2989) | rplQ | 449887..450270 (+) | 384 | WP_010946104.1 | 50S ribosomal protein L17 | - |
| LPC_RS02045 (LPC_2988) | ssb | 450337..450816 (-) | 480 | WP_011945554.1 | single-stranded DNA-binding protein | Machinery gene |
| LPC_RS02050 (LPC_2987) | - | 450900..452267 (-) | 1368 | WP_011945555.1 | MFS transporter | - |
| LPC_RS02055 (LPC_2986) | fabL | 452429..453187 (+) | 759 | WP_011945556.1 | enoyl-[acyl-carrier-protein] reductase FabL | - |
| LPC_RS02060 (LPC_2985) | - | 453258..453671 (+) | 414 | WP_010946108.1 | acyl carrier protein | - |
| LPC_RS02065 (LPC_2984) | - | 453671..454567 (+) | 897 | WP_011945557.1 | hydroxymyristoyl-ACP dehydratase | - |
Sequence
Protein
Download Length: 159 a.a. Molecular weight: 17640.40 Da Isoelectric Point: 4.6616
>NTDB_id=28217 LPC_RS02045 WP_011945554.1 450337..450816(-) (ssb) [Legionella pneumophila str. Corby]
MARGINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQDRTEWHRVVCFNRLGEIAGEYIRKGSKLYVE
GSLRTRKWQDQQGQDRYTTEIVASDIQMLDSKGNGATNYDDMPSFQGTSTPQQASTKNQATPTSTAQDAFDELDDDIPF
MARGINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQDRTEWHRVVCFNRLGEIAGEYIRKGSKLYVE
GSLRTRKWQDQQGQDRYTTEIVASDIQMLDSKGNGATNYDDMPSFQGTSTPQQASTKNQATPTSTAQDAFDELDDDIPF
Nucleotide
Download Length: 480 bp
>NTDB_id=28217 LPC_RS02045 WP_011945554.1 450337..450816(-) (ssb) [Legionella pneumophila str. Corby]
ATGGCAAGAGGAATAAATAAAGTAATACTTGTTGGTAATGTAGGGGCAGATCCTGATGTAAGGTATTTGCCTAACGGAAA
TGCTGTTACTACACTTTCAGTTGCTACCAGTGAAACATGGAAAGACAAAACGACAGGTGAAAAACAAGATAGAACTGAAT
GGCACAGAGTTGTCTGTTTTAATCGTCTGGGTGAAATAGCTGGAGAATACATTCGCAAAGGTTCCAAGCTATATGTCGAA
GGGAGCTTAAGAACAAGAAAATGGCAAGATCAACAGGGCCAAGATAGATATACAACTGAAATTGTTGCGTCTGACATTCA
AATGCTCGATAGCAAAGGAAATGGTGCCACTAATTACGATGACATGCCTTCATTTCAGGGAACCTCTACCCCTCAACAAG
CTTCAACAAAAAATCAAGCAACACCAACATCTACTGCACAAGATGCTTTTGATGAATTAGATGATGACATACCGTTTTAA
ATGGCAAGAGGAATAAATAAAGTAATACTTGTTGGTAATGTAGGGGCAGATCCTGATGTAAGGTATTTGCCTAACGGAAA
TGCTGTTACTACACTTTCAGTTGCTACCAGTGAAACATGGAAAGACAAAACGACAGGTGAAAAACAAGATAGAACTGAAT
GGCACAGAGTTGTCTGTTTTAATCGTCTGGGTGAAATAGCTGGAGAATACATTCGCAAAGGTTCCAAGCTATATGTCGAA
GGGAGCTTAAGAACAAGAAAATGGCAAGATCAACAGGGCCAAGATAGATATACAACTGAAATTGTTGCGTCTGACATTCA
AATGCTCGATAGCAAAGGAAATGGTGCCACTAATTACGATGACATGCCTTCATTTCAGGGAACCTCTACCCCTCAACAAG
CTTCAACAAAAAATCAAGCAACACCAACATCTACTGCACAAGATGCTTTTGATGAATTAGATGATGACATACCGTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
52.247 |
100 |
0.585 |
| ssb | Vibrio cholerae strain A1552 |
49.143 |
100 |
0.541 |
| ssb | Neisseria gonorrhoeae MS11 |
39.655 |
100 |
0.434 |
| ssb | Neisseria meningitidis MC58 |
39.655 |
100 |
0.434 |