Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | C9J81_RS07525 | Genome accession | NZ_CP028187 |
| Coordinates | 1412186..1412491 (-) | Length | 101 a.a. |
| NCBI ID | WP_002783353.1 | Uniprot ID | A0A401BKG4 |
| Organism | Campylobacter coli strain CFSAN054106 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1407186..1417491
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9J81_RS07490 (C9J81_07495) | - | 1407601..1408362 (+) | 762 | WP_072212081.1 | ATP-binding protein | - |
| C9J81_RS07495 (C9J81_07500) | - | 1408359..1409042 (+) | 684 | WP_002777124.1 | 3-methyladenine DNA glycosylase | - |
| C9J81_RS07500 (C9J81_07505) | thiD | 1409042..1409854 (+) | 813 | WP_002786353.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| C9J81_RS07505 (C9J81_07510) | thiE | 1409844..1410476 (+) | 633 | WP_002839213.1 | thiamine phosphate synthase | - |
| C9J81_RS07510 (C9J81_07515) | - | 1410454..1411083 (+) | 630 | WP_002780243.1 | uroporphyrinogen-III synthase | - |
| C9J81_RS07515 (C9J81_07520) | - | 1411076..1411528 (-) | 453 | WP_107128132.1 | hypothetical protein | - |
| C9J81_RS07520 (C9J81_07525) | - | 1411525..1412193 (-) | 669 | WP_002783356.1 | hypothetical protein | - |
| C9J81_RS07525 (C9J81_07530) | ctsT | 1412186..1412491 (-) | 306 | WP_002783353.1 | hypothetical protein | Machinery gene |
| C9J81_RS07530 (C9J81_07535) | proC | 1412488..1413225 (-) | 738 | WP_002780246.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| C9J81_RS07535 (C9J81_07540) | fliW | 1413225..1413614 (-) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| C9J81_RS07540 (C9J81_07545) | - | 1413778..1414425 (+) | 648 | WP_002777091.1 | outer membrane protein assembly factor BamD | - |
| C9J81_RS07545 (C9J81_07550) | lon | 1414441..1416816 (+) | 2376 | WP_002783351.1 | endopeptidase La | - |
| C9J81_RS07550 (C9J81_07555) | rpsR | 1416872..1417132 (-) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12395.26 Da Isoelectric Point: 6.4746
>NTDB_id=282142 C9J81_RS07525 WP_002783353.1 1412186..1412491(-) (ctsT) [Campylobacter coli strain CFSAN054106]
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTNPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTNPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=282142 C9J81_RS07525 WP_002783353.1 1412186..1412491(-) (ctsT) [Campylobacter coli strain CFSAN054106]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATCTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCA
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATCTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCA
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |