Detailed information
Bioinformatically predicted
Overview
| Name | ctsR | Type | Machinery gene |
| Locus tag | C9J81_RS05490 | Genome accession | NZ_CP028187 |
| Coordinates | 1006775..1007086 (+) | Length | 103 a.a. |
| NCBI ID | WP_002779316.1 | Uniprot ID | A0A3K5JRX6 |
| Organism | Campylobacter coli strain CFSAN054106 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1001775..1012086
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9J81_RS05480 (C9J81_05485) | - | 1002449..1003087 (+) | 639 | WP_002784063.1 | HAD family hydrolase | - |
| C9J81_RS05485 (C9J81_05490) | nifJ | 1003191..1006751 (+) | 3561 | WP_052793269.1 | pyruvate:ferredoxin (flavodoxin) oxidoreductase | - |
| C9J81_RS05490 (C9J81_05495) | ctsR | 1006775..1007086 (+) | 312 | WP_002779316.1 | hypothetical protein | Machinery gene |
| C9J81_RS05495 (C9J81_05500) | ctsD | 1007064..1008482 (+) | 1419 | WP_002779315.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| C9J81_RS05500 (C9J81_05505) | ctsP | 1008475..1009071 (+) | 597 | WP_107128045.1 | ATP-binding protein | Machinery gene |
| C9J81_RS05505 (C9J81_05510) | - | 1009068..1009664 (+) | 597 | WP_002779313.1 | CDC27 family protein | - |
| C9J81_RS05510 (C9J81_05515) | ctsE | 1009657..1011219 (+) | 1563 | WP_002779312.1 | GspE/PulE family protein | Machinery gene |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 12269.30 Da Isoelectric Point: 6.3244
>NTDB_id=282129 C9J81_RS05490 WP_002779316.1 1006775..1007086(+) (ctsR) [Campylobacter coli strain CFSAN054106]
MCFCTLLSYEDFEEYFKILNTKQNVELGNLQNPFFNPTFEKIKDIKIIAIMLDRVKIDNKWYKKGDKIGEAVITDITTKE
IILRYDTLDFKIAFKNNDKINIY
MCFCTLLSYEDFEEYFKILNTKQNVELGNLQNPFFNPTFEKIKDIKIIAIMLDRVKIDNKWYKKGDKIGEAVITDITTKE
IILRYDTLDFKIAFKNNDKINIY
Nucleotide
Download Length: 312 bp
>NTDB_id=282129 C9J81_RS05490 WP_002779316.1 1006775..1007086(+) (ctsR) [Campylobacter coli strain CFSAN054106]
TTGTGCTTTTGCACTTTGTTATCATATGAGGATTTTGAAGAATATTTTAAGATTTTAAACACCAAGCAGAATGTAGAGCT
TGGAAATCTTCAAAATCCATTCTTTAATCCTACTTTTGAAAAAATCAAAGACATAAAAATTATTGCTATTATGCTTGATA
GAGTAAAGATTGATAATAAATGGTATAAAAAGGGTGATAAGATAGGGGAGGCCGTGATTACTGATATTACTACAAAAGAA
ATTATTTTAAGATATGATACTTTGGATTTTAAAATAGCGTTTAAAAACAATGATAAGATTAATATTTATTAA
TTGTGCTTTTGCACTTTGTTATCATATGAGGATTTTGAAGAATATTTTAAGATTTTAAACACCAAGCAGAATGTAGAGCT
TGGAAATCTTCAAAATCCATTCTTTAATCCTACTTTTGAAAAAATCAAAGACATAAAAATTATTGCTATTATGCTTGATA
GAGTAAAGATTGATAATAAATGGTATAAAAAGGGTGATAAGATAGGGGAGGCCGTGATTACTGATATTACTACAAAAGAA
ATTATTTTAAGATATGATACTTTGGATTTTAAAATAGCGTTTAAAAACAATGATAAGATTAATATTTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsR | Campylobacter jejuni subsp. jejuni 81-176 |
55.882 |
99.029 |
0.553 |