Detailed information NTG0281895

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: EAH50_RS23575
• Genome accession: NZ_CP033096
• Coordinates: 4397964..4398989 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CP53
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4392964..4403989

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EAH50_RS23555 (EAH50_23850)	metJ	4394025..4394342 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
EAH50_RS23560 (EAH50_23855)	yiiX	4394526..4395134 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
EAH50_RS23565 (EAH50_23860)	rpmE	4395195..4395407 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
EAH50_RS23570 (EAH50_23865)	priA	4395610..4397808 (+)	2199	WP_001424430.1	primosomal protein N'	Machinery gene
EAH50_RS23575 (EAH50_23870)	cytR	4397964..4398989 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
EAH50_RS23580 (EAH50_23875)	ftsN	4399081..4400040 (+)	960	WP_000068828.1	cell division protein FtsN	-
EAH50_RS23585 (EAH50_23880)	hslV	4400133..4400663 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
EAH50_RS23590 (EAH50_23885)	hslU	4400673..4402004 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
EAH50_RS23595 (EAH50_23890)	menA	4402071..4402997 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
EAH50_RS23600 (EAH50_23895)	rraA	4403090..4403575 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
EAH50_RS23605 (EAH50_23900)	zapB	4403660..4403905 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=281895 EAH50_RS23575 WP_000644904.1 4397964..4398989(+) (cytR) [Escherichia coli strain CP53]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=281895 EAH50_RS23575 WP_000644904.1 4397964..4398989(+) (cytR) [Escherichia coli strain CP53]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628