Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   C9I27_RS07950 Genome accession   NZ_CP028148
Coordinates   1526420..1527145 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain TJ11-001     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1521420..1532145
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9I27_RS07915 - 1521554..1521937 (+) 384 WP_002988673.1 ImmA/IrrE family metallo-endopeptidase -
  C9I27_RS07920 - 1521948..1522499 (+) 552 WP_002988670.1 hypothetical protein -
  C9I27_RS07925 - 1522616..1523695 (+) 1080 WP_002988667.1 site-specific integrase -
  C9I27_RS07935 trmB 1523893..1524528 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  C9I27_RS07940 ccrZ 1524528..1525319 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  C9I27_RS07945 - 1525383..1526417 (-) 1035 WP_002988663.1 ABC transporter permease -
  C9I27_RS07950 pptA 1526420..1527145 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  C9I27_RS07955 - 1527217..1527636 (+) 420 WP_002988659.1 HIT family protein -
  C9I27_RS07960 - 1527633..1527989 (+) 357 WP_002988657.1 hypothetical protein -
  C9I27_RS07965 brpA 1528100..1529380 (-) 1281 WP_002988654.1 biofilm formation/cell division transcriptional regulator BrpA -
  C9I27_RS07970 - 1529389..1529913 (-) 525 WP_002988650.1 GNAT family N-acetyltransferase -
  C9I27_RS07975 tsaE 1529888..1530349 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  C9I27_RS07980 - 1530503..1531963 (-) 1461 WP_002988645.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=281706 C9I27_RS07950 WP_002983379.1 1526420..1527145(-) (pptA) [Streptococcus pyogenes strain TJ11-001]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=281706 C9I27_RS07950 WP_002983379.1 1526420..1527145(-) (pptA) [Streptococcus pyogenes strain TJ11-001]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment