Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   C5P47_RS08540 Genome accession   NZ_CP028140
Coordinates   1694277..1694990 (+) Length   237 a.a.
NCBI ID   WP_032464617.1    Uniprot ID   A0A9X8T0Q6
Organism   Streptococcus pyogenes strain NGAS979     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1689277..1699990
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5P47_RS08530 (C5P47_08515) treC 1690347..1691975 (-) 1629 WP_032464615.1 alpha,alpha-phosphotrehalase -
  C5P47_RS08535 (C5P47_08520) treP 1692042..1694066 (-) 2025 WP_032464616.1 PTS system trehalose-specific EIIBC component -
  C5P47_RS08540 (C5P47_08525) treR 1694277..1694990 (+) 714 WP_032464617.1 trehalose operon repressor Regulator
  C5P47_RS08550 (C5P47_08535) - 1695269..1695600 (-) 332 Protein_1585 helix-turn-helix domain-containing protein -
  C5P47_RS08555 (C5P47_08540) - 1695786..1696643 (+) 858 WP_032464618.1 VOC family protein -
  C5P47_RS08560 (C5P47_08545) yaaA 1696685..1697416 (+) 732 WP_011055084.1 peroxide stress protein YaaA -
  C5P47_RS08565 (C5P47_08550) nrdG 1697590..1698204 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  C5P47_RS08570 (C5P47_08555) - 1698204..1698713 (-) 510 WP_032464619.1 GNAT family N-acetyltransferase -
  C5P47_RS08575 (C5P47_08560) - 1698722..1699657 (-) 936 WP_032464621.1 Gfo/Idh/MocA family oxidoreductase -
  C5P47_RS09160 - 1699686..1699832 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27661.89 Da        Isoelectric Point: 9.7425

>NTDB_id=281611 C5P47_RS08540 WP_032464617.1 1694277..1694990(+) (treR) [Streptococcus pyogenes strain NGAS979]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFRKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=281611 C5P47_RS08540 WP_032464617.1 1694277..1694990(+) (treR) [Streptococcus pyogenes strain NGAS979]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAGTACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACTAAGGCAG
GCCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCATCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTCGCAAAAACAGTTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTAG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATCTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTCGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment