Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   C5P47_RS07005 Genome accession   NZ_CP028140
Coordinates   1369302..1370027 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NGAS979     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1364302..1375027
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5P47_RS06970 (C5P47_06955) - 1364335..1364631 (-) 297 WP_002983486.1 YlxR family protein -
  C5P47_RS06975 (C5P47_06960) nusA 1364647..1365804 (-) 1158 WP_002994325.1 transcription termination factor NusA -
  C5P47_RS06980 (C5P47_06965) rimP 1365979..1366515 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  C5P47_RS06990 (C5P47_06975) trmB 1366774..1367409 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  C5P47_RS06995 (C5P47_06980) - 1367419..1368201 (-) 783 WP_032464515.1 phosphotransferase family protein -
  C5P47_RS07000 (C5P47_06985) - 1368265..1369299 (-) 1035 WP_010922583.1 ABC transporter permease -
  C5P47_RS07005 (C5P47_06990) pptA 1369302..1370027 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  C5P47_RS07010 (C5P47_06995) - 1370099..1370518 (+) 420 WP_002983376.1 HIT family protein -
  C5P47_RS07015 (C5P47_07000) - 1370515..1370871 (+) 357 WP_032464516.1 hypothetical protein -
  C5P47_RS07020 (C5P47_07005) - 1370982..1372265 (-) 1284 WP_032464517.1 LCP family protein -
  C5P47_RS07025 (C5P47_07010) - 1372274..1372798 (-) 525 WP_020905405.1 N-acetyltransferase -
  C5P47_RS07030 (C5P47_07015) tsaE 1372773..1373234 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  C5P47_RS07035 (C5P47_07020) - 1373388..1374848 (-) 1461 WP_012560892.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=281605 C5P47_RS07005 WP_002983379.1 1369302..1370027(-) (pptA) [Streptococcus pyogenes strain NGAS979]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=281605 C5P47_RS07005 WP_002983379.1 1369302..1370027(-) (pptA) [Streptococcus pyogenes strain NGAS979]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment