Detailed information NTG0281538

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: C4X49_RS08485
• Genome accession: NZ_CP028138
• Coordinates: 1710227..1710928 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594581.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain NCIMB 8209
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1705227..1715928

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C4X49_RS08450 (C4X49_08450)	kdsB	1705750..1706511 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
C4X49_RS08455 (C4X49_08455)	-	1706523..1707503 (+)	981	WP_130089766.1	DNA polymerase III subunit delta'	-
C4X49_RS08460 (C4X49_08460)	-	1707515..1707856 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
C4X49_RS08465 (C4X49_08465)	-	1707874..1708647 (+)	774	WP_000497302.1	TatD family hydrolase	-
C4X49_RS08470 (C4X49_08470)	-	1708685..1709293 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
C4X49_RS08475 (C4X49_08475)	-	1709303..1709857 (+)	555	WP_002057406.1	type II secretion system protein	-
C4X49_RS08480 (C4X49_08480)	xcpV	1709847..1710227 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
C4X49_RS08485 (C4X49_08485)	xcpW	1710227..1710928 (+)	702	WP_000594581.1	type II secretion system minor pseudopilin GspJ	Machinery gene
C4X49_RS08490 (C4X49_08490)	gspK	1710928..1711887 (+)	960	WP_005139244.1	type II secretion system minor pseudopilin GspK	-
C4X49_RS08495 (C4X49_08495)	-	1712117..1712713 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
C4X49_RS08500 (C4X49_08500)	ung	1712764..1713477 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
C4X49_RS08505 (C4X49_08505)	-	1713474..1714598 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
C4X49_RS08510 (C4X49_08510)	tadA	1714605..1715108 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
C4X49_RS08515 (C4X49_08515)	-	1715178..1715621 (+)	444	WP_002057383.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26731.68 Da
• Isoelectric Point: 9.3468

>NTDB_id=281538 C4X49_RS08485 WP_000594581.1 1710227..1710928(+) (xcpW) [Acinetobacter baumannii strain NCIMB 8209]
MIKNKYIHIRSFSSRLAERSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=281538 C4X49_RS08485 WP_000594581.1 1710227..1710928(+) (xcpW) [Acinetobacter baumannii strain NCIMB 8209]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGTCTTGCAGAACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAAATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983