Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | C7V42_RS16615 | Genome accession | NZ_CP028127 |
| Coordinates | 3637745..3638170 (-) | Length | 141 a.a. |
| NCBI ID | WP_010363792.1 | Uniprot ID | A0A836P3K8 |
| Organism | Xanthomonas vasicola pv. vasculorum strain SAM119 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3632745..3643170
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7V42_RS16600 (C7V42_16575) | - | 3634059..3635387 (-) | 1329 | Protein_3090 | hypothetical protein | - |
| C7V42_RS16610 (C7V42_16585) | - | 3636020..3637609 (-) | 1590 | WP_010363790.1 | phosphoethanolamine transferase | - |
| C7V42_RS16615 (C7V42_16590) | pilA2 | 3637745..3638170 (-) | 426 | WP_010363792.1 | pilin | Machinery gene |
| C7V42_RS16620 (C7V42_16595) | pilC | 3638522..3639781 (+) | 1260 | WP_017116967.1 | type II secretion system F family protein | Machinery gene |
| C7V42_RS16625 (C7V42_16600) | - | 3639788..3640651 (+) | 864 | WP_017117848.1 | A24 family peptidase | - |
| C7V42_RS16630 (C7V42_16605) | coaE | 3640665..3641270 (+) | 606 | WP_010363800.1 | dephospho-CoA kinase | - |
| C7V42_RS16635 (C7V42_16610) | - | 3641342..3642676 (-) | 1335 | WP_010363803.1 | HAMP domain-containing sensor histidine kinase | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 14428.65 Da Isoelectric Point: 9.0171
>NTDB_id=281388 C7V42_RS16615 WP_010363792.1 3637745..3638170(-) (pilA2) [Xanthomonas vasicola pv. vasculorum strain SAM119]
MKKQQGFTLIELMIVVAIIAILAAIALPAYQDYTTRAKLSEALTMSAPAKLAVTETASSLGGLANVTSANSGYAFPGATK
YVSGITITNATGQVAVTSTVPNATGTILLTPVDVGGGQLKWTCSSAINTKYLPAECRNSGT
MKKQQGFTLIELMIVVAIIAILAAIALPAYQDYTTRAKLSEALTMSAPAKLAVTETASSLGGLANVTSANSGYAFPGATK
YVSGITITNATGQVAVTSTVPNATGTILLTPVDVGGGQLKWTCSSAINTKYLPAECRNSGT
Nucleotide
Download Length: 426 bp
>NTDB_id=281388 C7V42_RS16615 WP_010363792.1 3637745..3638170(-) (pilA2) [Xanthomonas vasicola pv. vasculorum strain SAM119]
ATGAAGAAGCAGCAAGGCTTTACACTTATCGAACTGATGATCGTGGTCGCGATCATTGCCATTCTGGCCGCCATCGCGCT
GCCGGCTTATCAGGACTACACCACTCGCGCCAAGCTCAGCGAGGCGCTGACGATGTCGGCGCCTGCCAAGCTTGCGGTAA
CTGAGACCGCATCGTCGCTCGGCGGTCTTGCTAATGTTACTTCTGCGAATTCGGGCTACGCATTCCCGGGTGCTACGAAG
TATGTCAGCGGCATCACCATCACCAATGCTACGGGCCAAGTCGCTGTAACCTCGACCGTGCCGAACGCAACCGGTACCAT
CCTGCTGACGCCGGTTGATGTTGGTGGTGGCCAGCTGAAGTGGACCTGCTCTTCCGCCATCAACACCAAGTACCTGCCGG
CGGAGTGCCGTAACTCGGGCACCTGA
ATGAAGAAGCAGCAAGGCTTTACACTTATCGAACTGATGATCGTGGTCGCGATCATTGCCATTCTGGCCGCCATCGCGCT
GCCGGCTTATCAGGACTACACCACTCGCGCCAAGCTCAGCGAGGCGCTGACGATGTCGGCGCCTGCCAAGCTTGCGGTAA
CTGAGACCGCATCGTCGCTCGGCGGTCTTGCTAATGTTACTTCTGCGAATTCGGGCTACGCATTCCCGGGTGCTACGAAG
TATGTCAGCGGCATCACCATCACCAATGCTACGGGCCAAGTCGCTGTAACCTCGACCGTGCCGAACGCAACCGGTACCAT
CCTGCTGACGCCGGTTGATGTTGGTGGTGGCCAGCTGAAGTGGACCTGCTCTTCCGCCATCAACACCAAGTACCTGCCGG
CGGAGTGCCGTAACTCGGGCACCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
52.206 |
96.454 |
0.504 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
52.206 |
96.454 |
0.504 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
41.212 |
100 |
0.482 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
36.216 |
100 |
0.475 |
| comP | Acinetobacter baylyi ADP1 |
43.046 |
100 |
0.461 |
| pilE | Neisseria gonorrhoeae MS11 |
39.264 |
100 |
0.454 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
38.608 |
100 |
0.433 |
| pilA/pilA1 | Eikenella corrodens VA1 |
40.667 |
100 |
0.433 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
43.478 |
97.872 |
0.426 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
42.222 |
95.745 |
0.404 |
| pilA | Pseudomonas aeruginosa PAK |
36.129 |
100 |
0.397 |
| pilA | Acinetobacter baumannii strain A118 |
37.415 |
100 |
0.39 |