Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C7V42_RS15885 Genome accession   NZ_CP028127
Coordinates   3467251..3467652 (-) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas vasicola pv. vasculorum strain SAM119     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3462251..3472652
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7V42_RS15870 (C7V42_15845) - 3464265..3466301 (-) 2037 WP_017122144.1 methyl-accepting chemotaxis protein -
  C7V42_RS15875 (C7V42_15850) - 3466341..3466871 (-) 531 WP_003482487.1 chemotaxis protein CheW -
  C7V42_RS15880 (C7V42_15855) - 3466871..3467233 (-) 363 WP_010375173.1 response regulator -
  C7V42_RS15885 (C7V42_15860) pilG 3467251..3467652 (-) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  C7V42_RS15890 (C7V42_15865) gshB 3467889..3468839 (+) 951 WP_010364206.1 glutathione synthase -
  C7V42_RS15895 (C7V42_15870) - 3468836..3469711 (+) 876 WP_010364204.1 energy transducer TonB -
  C7V42_RS15900 (C7V42_15875) - 3470013..3470927 (-) 915 WP_087910825.1 ADP-ribosylglycohydrolase family protein -
  C7V42_RS15905 (C7V42_15880) tsaB 3470924..3471643 (-) 720 WP_010375169.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=281384 C7V42_RS15885 WP_005913706.1 3467251..3467652(-) (pilG) [Xanthomonas vasicola pv. vasculorum strain SAM119]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=281384 C7V42_RS15885 WP_005913706.1 3467251..3467652(-) (pilG) [Xanthomonas vasicola pv. vasculorum strain SAM119]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAGACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAAATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAAGATGGCCTGTTCGACAAGGCGCGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGCGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment