Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   C4N19_RS11055 Genome accession   NZ_CP028102
Coordinates   2202050..2203003 (-) Length   317 a.a.
NCBI ID   WP_005887194.1    Uniprot ID   A0A6N7VMA5
Organism   Fusobacterium mortiferum ATCC 9817     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2197050..2208003
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C4N19_RS11030 (C4N19_11030) - 2197562..2197915 (+) 354 WP_040494150.1 helix-turn-helix domain-containing protein -
  C4N19_RS11035 (C4N19_11035) - 2198608..2199021 (-) 414 WP_005887202.1 EamA family transporter -
  C4N19_RS11040 (C4N19_11040) - 2199401..2200330 (-) 930 WP_005887200.1 siderophore ABC transporter substrate-binding protein -
  C4N19_RS11045 (C4N19_11045) - 2200340..2201095 (-) 756 WP_005887197.1 ABC transporter ATP-binding protein -
  C4N19_RS11050 (C4N19_11050) - 2201092..2202060 (-) 969 WP_005887196.1 iron chelate uptake ABC transporter family permease subunit -
  C4N19_RS11055 (C4N19_11055) ceuB 2202050..2203003 (-) 954 WP_005887194.1 ABC transporter permease Machinery gene
  C4N19_RS11060 (C4N19_11060) - 2203032..2205056 (-) 2025 WP_005887192.1 TonB-dependent receptor -
  C4N19_RS11065 (C4N19_11065) - 2205258..2207177 (+) 1920 WP_005887189.1 alpha/beta hydrolase-fold protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34464.55 Da        Isoelectric Point: 9.1674

>NTDB_id=281203 C4N19_RS11055 WP_005887194.1 2202050..2203003(-) (ceuB) [Fusobacterium mortiferum ATCC 9817]
MYNIVVTVALLLLAMISTLLGVASTEINEIFVQGSHSYNIFIFSRIPRTISIIVAGFGMSICGLIMQQLTMNKFVSPTTA
GTSEASKLGILVAMIFFPYESLILKMIVASIFAMGGTFLFLGIIRKIKSKDNVLVPLIGIMISGIVSSLTMFFAYKGDMI
QNLSAWLFGDFSGVIKGNYELLYLTIPLVIVAFLYSKKFTISGLGEEFATNLGLNYKQVVNIGLGLVCIISSLIIITIGA
IPFLGLIIPNIVSMFNGDNLSKNIYLSGISGSAFLLLCDILGRVIIYPYEIQIGLVSGVIGSGIFLILILRRLKLEY

Nucleotide


Download         Length: 954 bp        

>NTDB_id=281203 C4N19_RS11055 WP_005887194.1 2202050..2203003(-) (ceuB) [Fusobacterium mortiferum ATCC 9817]
ATGTACAATATAGTTGTAACTGTGGCTCTTCTACTCCTAGCAATGATTTCTACATTGTTAGGGGTAGCTTCCACAGAGAT
AAATGAAATCTTTGTTCAAGGAAGTCATAGCTATAATATATTTATATTTAGTAGAATTCCAAGGACAATCAGTATAATAG
TAGCAGGATTTGGAATGAGTATTTGTGGACTTATTATGCAACAGCTCACTATGAATAAGTTTGTATCCCCTACTACTGCA
GGAACATCAGAGGCTTCAAAGCTAGGAATATTAGTGGCGATGATATTCTTTCCTTATGAGAGCCTTATTTTAAAGATGAT
AGTAGCTTCTATTTTTGCTATGGGAGGGACTTTTCTATTTTTAGGAATTATCAGAAAGATAAAATCTAAAGATAATGTAT
TAGTACCACTGATAGGAATTATGATAAGTGGGATAGTAAGCTCACTGACTATGTTTTTTGCTTATAAGGGAGATATGATA
CAAAATCTTAGTGCTTGGTTATTTGGAGATTTTTCAGGGGTAATAAAGGGAAATTATGAGTTACTTTATCTCACTATCCC
ATTGGTAATAGTTGCCTTCCTATACTCTAAAAAATTTACAATCTCAGGGTTAGGAGAGGAGTTTGCTACAAACTTGGGAC
TGAACTATAAGCAAGTTGTAAATATTGGGCTTGGGCTTGTTTGTATTATCTCATCTCTAATAATCATAACAATAGGAGCT
ATCCCATTTTTAGGATTAATCATTCCAAATATTGTTTCTATGTTCAATGGAGATAATCTTTCTAAAAATATCTATCTAAG
TGGAATCTCTGGAAGTGCCTTTTTACTTCTTTGTGATATTTTAGGAAGAGTTATAATCTATCCATATGAGATACAAATAG
GTTTAGTATCTGGTGTCATAGGAAGTGGAATTTTCTTAATACTTATTTTAAGGAGGTTAAAACTTGAATACTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N7VMA5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

49.675

97.161

0.483

Multiple sequence alignment