Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilA5 | Type | Machinery gene |
| Locus tag | C7I86_RS10505 | Genome accession | NZ_CP028094 |
| Coordinates | 2222013..2222471 (+) | Length | 152 a.a. |
| NCBI ID | WP_020862233.1 | Uniprot ID | - |
| Organism | Synechocystis sp. IPPAS B-1465 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2217013..2227471
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7I86_RS10490 (C7I86_10470) | - | 2217316..2220015 (-) | 2700 | WP_010873202.1 | chloride channel protein | - |
| C7I86_RS10495 (C7I86_10475) | - | 2220130..2220633 (+) | 504 | WP_020862235.1 | hypothetical protein | - |
| C7I86_RS10500 (C7I86_10480) | - | 2220581..2221801 (+) | 1221 | WP_010873204.1 | DUF58 domain-containing protein | - |
| C7I86_RS10505 (C7I86_10485) | pilA/pilA5 | 2222013..2222471 (+) | 459 | WP_020862233.1 | hypothetical protein | Machinery gene |
| C7I86_RS10510 (C7I86_10490) | - | 2222494..2223039 (+) | 546 | WP_231848034.1 | Tfp pilus assembly protein FimT/FimU | - |
| C7I86_RS10515 (C7I86_10495) | - | 2223156..2223716 (+) | 561 | WP_010873207.1 | Tfp pilus assembly protein FimT/FimU | - |
| C7I86_RS10520 (C7I86_10500) | - | 2223738..2224655 (+) | 918 | WP_010873208.1 | PilW family protein | - |
| C7I86_RS10525 (C7I86_10505) | - | 2224713..2225408 (+) | 696 | WP_010873209.1 | alpha/beta fold hydrolase | - |
| C7I86_RS10530 (C7I86_10510) | - | 2225629..2225919 (-) | 291 | WP_223211274.1 | hypothetical protein | - |
| C7I86_RS10535 (C7I86_10515) | - | 2226118..2226549 (-) | 432 | WP_010873211.1 | hypothetical protein | - |
| C7I86_RS10540 (C7I86_10520) | - | 2226606..2227370 (-) | 765 | WP_010873212.1 | IS5 family transposase | - |
Sequence
Protein
Download Length: 152 a.a. Molecular weight: 16141.38 Da Isoelectric Point: 4.3321
>NTDB_id=281182 C7I86_RS10505 WP_020862233.1 2222013..2222471(+) (pilA/pilA5) [Synechocystis sp. IPPAS B-1465]
MFEVLIALMISFLFLTGTLNAMVMATVMRVKAEREAQAGYWIKEDLEQVRALAANFNPATGNGCPTSVGETFRDANNSAD
ADPNNDGLASLPVPANKSIVGVTAAITRTPGVSNNVLTLSYRVRNTNVTDNDMATLATLYTEVLPAAALACE
MFEVLIALMISFLFLTGTLNAMVMATVMRVKAEREAQAGYWIKEDLEQVRALAANFNPATGNGCPTSVGETFRDANNSAD
ADPNNDGLASLPVPANKSIVGVTAAITRTPGVSNNVLTLSYRVRNTNVTDNDMATLATLYTEVLPAAALACE
Nucleotide
Download Length: 459 bp
>NTDB_id=281182 C7I86_RS10505 WP_020862233.1 2222013..2222471(+) (pilA/pilA5) [Synechocystis sp. IPPAS B-1465]
ATGTTCGAGGTGCTGATTGCCTTGATGATTTCCTTTCTATTTCTGACAGGAACCCTGAATGCCATGGTAATGGCAACGGT
AATGCGGGTTAAAGCGGAAAGAGAGGCCCAAGCTGGCTATTGGATAAAAGAAGATTTAGAGCAAGTTCGGGCATTAGCTG
CAAACTTCAATCCGGCAACTGGTAATGGATGCCCTACAAGTGTGGGTGAAACTTTTCGAGATGCAAACAATAGTGCTGAC
GCCGATCCTAACAATGATGGACTAGCGAGCTTACCAGTTCCTGCCAACAAATCAATTGTCGGTGTAACAGCCGCTATTAC
TAGAACACCAGGGGTATCTAATAACGTTTTAACTCTTAGCTATCGTGTCAGGAACACCAATGTCACCGACAATGATATGG
CTACCCTTGCAACACTTTACACCGAGGTTCTTCCTGCTGCCGCTCTTGCTTGTGAATAG
ATGTTCGAGGTGCTGATTGCCTTGATGATTTCCTTTCTATTTCTGACAGGAACCCTGAATGCCATGGTAATGGCAACGGT
AATGCGGGTTAAAGCGGAAAGAGAGGCCCAAGCTGGCTATTGGATAAAAGAAGATTTAGAGCAAGTTCGGGCATTAGCTG
CAAACTTCAATCCGGCAACTGGTAATGGATGCCCTACAAGTGTGGGTGAAACTTTTCGAGATGCAAACAATAGTGCTGAC
GCCGATCCTAACAATGATGGACTAGCGAGCTTACCAGTTCCTGCCAACAAATCAATTGTCGGTGTAACAGCCGCTATTAC
TAGAACACCAGGGGTATCTAATAACGTTTTAACTCTTAGCTATCGTGTCAGGAACACCAATGTCACCGACAATGATATGG
CTACCCTTGCAACACTTTACACCGAGGTTCTTCCTGCTGCCGCTCTTGCTTGTGAATAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilA5 | Synechocystis sp. PCC 6803 |
100 |
100 |
1 |