Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilA1 | Type | Machinery gene |
| Locus tag | C7I86_RS06105 | Genome accession | NZ_CP028094 |
| Coordinates | 1295810..1296316 (-) | Length | 168 a.a. |
| NCBI ID | WP_010872381.1 | Uniprot ID | - |
| Organism | Synechocystis sp. IPPAS B-1465 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1290810..1301316
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7I86_RS06080 (C7I86_06065) | - | 1291032..1291496 (+) | 465 | WP_010872376.1 | DUF29 domain-containing protein | - |
| C7I86_RS06085 (C7I86_06070) | - | 1291637..1292173 (+) | 537 | WP_010872377.1 | methyltransferase domain-containing protein | - |
| C7I86_RS06090 (C7I86_06075) | - | 1292215..1294368 (+) | 2154 | WP_010872378.1 | hypothetical protein | - |
| C7I86_RS06095 (C7I86_06080) | - | 1294385..1295197 (-) | 813 | WP_010872379.1 | hypothetical protein | - |
| C7I86_RS06100 (C7I86_06085) | - | 1295199..1295711 (-) | 513 | WP_010872380.1 | type IV pilin protein | - |
| C7I86_RS06105 (C7I86_06090) | pilA/pilA1 | 1295810..1296316 (-) | 507 | WP_010872381.1 | type IV pilin protein | Machinery gene |
| C7I86_RS06110 (C7I86_06095) | - | 1296460..1297782 (-) | 1323 | WP_010872382.1 | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | - |
| C7I86_RS06115 (C7I86_06100) | - | 1297937..1298542 (+) | 606 | WP_010872383.1 | hypothetical protein | - |
| C7I86_RS06120 (C7I86_06105) | - | 1298546..1298983 (-) | 438 | WP_010872384.1 | DUF29 domain-containing protein | - |
| C7I86_RS06125 (C7I86_06110) | - | 1298976..1299428 (-) | 453 | WP_010872385.1 | DUF4351 domain-containing protein | - |
| C7I86_RS06130 (C7I86_06115) | - | 1299478..1300473 (+) | 996 | WP_010872386.1 | pentapeptide repeat-containing protein | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 17573.69 Da Isoelectric Point: 4.4065
>NTDB_id=281175 C7I86_RS06105 WP_010872381.1 1295810..1296316(-) (pilA/pilA1) [Synechocystis sp. IPPAS B-1465]
MASNFKFKLLSQLSKKRAEGGFTLIELLVVVIIIGVLAAIALPNLLGQVGKARESEAKSTIGALNRAQQGYFTEKGTFAT
DTETLEVPAPDGNFFSFAVNTADNTEAIQDATALNWEADGTRSMSGGTFYDSGTRAFSTVVCRAEAGSEDTPPTPGGAND
CGGAEVIK
MASNFKFKLLSQLSKKRAEGGFTLIELLVVVIIIGVLAAIALPNLLGQVGKARESEAKSTIGALNRAQQGYFTEKGTFAT
DTETLEVPAPDGNFFSFAVNTADNTEAIQDATALNWEADGTRSMSGGTFYDSGTRAFSTVVCRAEAGSEDTPPTPGGAND
CGGAEVIK
Nucleotide
Download Length: 507 bp
>NTDB_id=281175 C7I86_RS06105 WP_010872381.1 1295810..1296316(-) (pilA/pilA1) [Synechocystis sp. IPPAS B-1465]
ATGGCTAGTAATTTTAAATTCAAACTCCTCTCTCAACTCTCCAAAAAACGGGCAGAAGGTGGTTTCACCTTAATCGAACT
GCTGGTTGTTGTAATTATTATCGGTGTATTGGCTGCTATTGCTCTGCCTAACCTCTTGGGTCAAGTTGGTAAAGCACGGG
AGTCCGAAGCTAAATCCACTATCGGTGCTTTGAACCGTGCCCAACAAGGTTATTTTACTGAGAAGGGTACGTTTGCAACC
GATACGGAAACGCTTGAAGTCCCAGCTCCTGATGGTAATTTCTTTAGTTTTGCAGTTAACACTGCTGACAACACAGAAGC
TATCCAAGACGCAACGGCATTGAATTGGGAGGCTGACGGCACCCGCTCCATGTCAGGTGGAACGTTTTACGATTCAGGCA
CCCGCGCCTTCAGTACTGTTGTTTGTCGGGCTGAAGCAGGTAGTGAAGATACTCCCCCAACCCCAGGAGGGGCTAATGAT
TGTGGTGGTGCTGAAGTAATTAAATAG
ATGGCTAGTAATTTTAAATTCAAACTCCTCTCTCAACTCTCCAAAAAACGGGCAGAAGGTGGTTTCACCTTAATCGAACT
GCTGGTTGTTGTAATTATTATCGGTGTATTGGCTGCTATTGCTCTGCCTAACCTCTTGGGTCAAGTTGGTAAAGCACGGG
AGTCCGAAGCTAAATCCACTATCGGTGCTTTGAACCGTGCCCAACAAGGTTATTTTACTGAGAAGGGTACGTTTGCAACC
GATACGGAAACGCTTGAAGTCCCAGCTCCTGATGGTAATTTCTTTAGTTTTGCAGTTAACACTGCTGACAACACAGAAGC
TATCCAAGACGCAACGGCATTGAATTGGGAGGCTGACGGCACCCGCTCCATGTCAGGTGGAACGTTTTACGATTCAGGCA
CCCGCGCCTTCAGTACTGTTGTTTGTCGGGCTGAAGCAGGTAGTGAAGATACTCCCCCAACCCCAGGAGGGGCTAATGAT
TGTGGTGGTGCTGAAGTAATTAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilA1 | Synechocystis sp. PCC 6803 |
100 |
100 |
1 |