Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   C1N69_RS07655 Genome accession   NZ_CP027986
Coordinates   1635709..1636335 (+) Length   208 a.a.
NCBI ID   WP_155030937.1    Uniprot ID   -
Organism   Enterobacter sichuanensis strain SGAir0282     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1630709..1641335
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C1N69_RS07635 (C1N69_07705) - 1631110..1632870 (-) 1761 WP_155030936.1 AAA family ATPase -
  C1N69_RS07640 (C1N69_07710) matP 1633057..1633509 (+) 453 WP_023332611.1 macrodomain Ter protein MatP -
  C1N69_RS07645 (C1N69_07715) ompA 1633572..1634627 (-) 1056 WP_023292865.1 porin OmpA -
  C1N69_RS07650 (C1N69_07725) sulA 1634982..1635491 (-) 510 WP_025755976.1 SOS-induced cell division inhibitor SulA -
  C1N69_RS07655 (C1N69_07730) sxy/tfoX 1635709..1636335 (+) 627 WP_155030937.1 TfoX/Sxy family DNA transformation protein Regulator
  C1N69_RS07660 (C1N69_07735) yccS 1636292..1638454 (-) 2163 WP_155030938.1 YccS family putative transporter -
  C1N69_RS07665 (C1N69_07740) - 1638474..1638920 (-) 447 WP_025755973.1 YccF domain-containing protein -
  C1N69_RS07670 (C1N69_07745) helD 1639043..1641097 (+) 2055 WP_155030939.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23802.36 Da        Isoelectric Point: 9.4588

>NTDB_id=281114 C1N69_RS07655 WP_155030937.1 1635709..1636335(+) (sxy/tfoX) [Enterobacter sichuanensis strain SGAir0282]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSYALSAARKERNLRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEAQDNHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=281114 C1N69_RS07655 WP_155030937.1 1635709..1636335(+) (sxy/tfoX) [Enterobacter sichuanensis strain SGAir0282]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCTCCGCTGGGCGAAATCCATCATCGTGCGCT
GTTTGGCGGTTACACCCTGGCGGTGGATGATGCGGTCTTTGCCATGGTGTCAGACGGCGAACTATATCTTCGTGCGTGTG
AGGAAAGTGCAAAATACTGTGTAAAAAATGCCGCCTCGTTTTTAACGCTGATGAAGCGAGGTCGTCCGGTACTGCTCAAC
TATTATCGTGTTGACGACGGCTTATGGCAGGACAGAGAGCGGCTGCTTCAGCTCTCCTCGTATGCCCTCAGTGCCGCAAG
AAAAGAGCGCAACCTGCGGCATCAACGAAACCGACTTAAGGATCTGCCGAACCTGACTTTTCAGCTTGAAGTCCTGCTGT
TTGAAGCCGGTATCACCAATGAAGAGACACTCCGGGCGCTGGGCGCCAGAGCCAGCTGGCTGAAGATGCGGGCGAAAAAT
AAAGCGCTGAGTATAAAAGTGCTCTTCGCGCTGGAAGGGGCGATTGAGGGGCTGCATGAGGCGGCGCTCCCGGCAGGTAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTACCTGAGGCACAGGATAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567

Multiple sequence alignment