Detailed information NTG0028093

Bioinformatically predicted

Overview

• Name: pilP
• Type: Machinery gene
• Locus tag: VC0395_RS16390
• Genome accession: NC_009457
• Coordinates: 2356787..2357305 (-)
• Length: 172 a.a.
• NCBI ID: WP_000792032.1
• Uniprot ID: -
• Organism: Vibrio cholerae O395
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2351787..2362305

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VC0395_RS16375 (VC0395_A2205)	aroB	2353222..2354307 (-)	1086	WP_000439805.1	3-dehydroquinate synthase	-
VC0395_RS16380 (VC0395_A2206)	aroK	2354335..2354859 (-)	525	WP_000818616.1	shikimate kinase AroK	-
VC0395_RS16385 (VC0395_A2207)	pilQ	2355046..2356761 (-)	1716	WP_000788426.1	type IV pilus secretin PilQ	Machinery gene
VC0395_RS16390 (VC0395_A2208)	pilP	2356787..2357305 (-)	519	WP_000792032.1	pilus assembly protein PilP	Machinery gene
VC0395_RS16395 (VC0395_A2209)	pilO	2357295..2357885 (-)	591	WP_000157690.1	type 4a pilus biogenesis protein PilO	Machinery gene
VC0395_RS16400 (VC0395_A2210)	pilN	2357878..2358462 (-)	585	WP_000902745.1	PilN domain-containing protein	Machinery gene
VC0395_RS16405 (VC0395_A2211)	pilM	2358452..2359468 (-)	1017	WP_000520444.1	type IV pilus assembly protein PilM	Machinery gene
VC0395_RS16410 (VC0395_A2212)	-	2359611..2362088 (+)	2478	WP_000668744.1	penicillin-binding protein 1A	-

Sequence

Protein

• Length: 172 a.a.
• Molecular weight: 19084.25 Da
• Isoelectric Point: 10.0857

>NTDB_id=28093 VC0395_RS16390 WP_000792032.1 2356787..2357305(-) (pilP) [Vibrio cholerae O395]
MKNKPLGLWLMSLLVLVGCKANQDDLTSYVAQVEREARKEVTKLKPILEFEATPYQQHKGREPFVLPKEALVQNQPLAKA
DCWQPVPRAKNGPLERYPLHQLRLKGVMSSGGSISALVQTPAGSVVKVKAGQYVGINNGKVTRVDDNYLLINETLPDGLG
CWNQRNVKLALK

Nucleotide

• Length: 519 bp

>NTDB_id=28093 VC0395_RS16390 WP_000792032.1 2356787..2357305(-) (pilP) [Vibrio cholerae O395]
ATGAAAAATAAGCCACTTGGATTATGGCTGATGAGTTTGCTGGTGTTGGTCGGGTGTAAGGCGAACCAAGATGATTTGAC
CTCATACGTCGCGCAAGTTGAGCGTGAAGCGCGCAAAGAAGTAACTAAGCTCAAACCCATTTTAGAGTTTGAAGCCACGC
CCTATCAGCAGCACAAGGGGCGTGAGCCGTTTGTCTTACCGAAAGAAGCGTTAGTGCAAAACCAACCGCTGGCCAAAGCC
GACTGTTGGCAACCCGTGCCACGTGCGAAAAATGGGCCGTTGGAGCGTTATCCATTGCACCAATTGCGCTTAAAAGGGGT
GATGAGCAGCGGGGGCAGTATCTCTGCCTTAGTGCAAACGCCGGCAGGGAGTGTGGTCAAGGTTAAGGCGGGTCAATATG
TCGGAATCAATAATGGCAAAGTCACCCGAGTCGACGACAACTATTTGTTAATTAATGAAACTTTGCCTGATGGCTTAGGG
TGTTGGAATCAGCGTAACGTCAAGCTGGCTTTAAAATAA

Domains

Predicted by InterproScan.

• Pilus assembly protein, PilP (PilP) (25-171)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilP	Vibrio cholerae strain A1552	100	100	1
pilP	Vibrio campbellii strain DS40M4	56.395	100	0.564