Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   C7J89_RS05765 Genome accession   NZ_CP027846
Coordinates   1181411..1182136 (-) Length   241 a.a.
NCBI ID   WP_061855581.1    Uniprot ID   A0A151A184
Organism   Staphylococcus kloosii strain ATCC 43959     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1176411..1187136
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7J89_RS05745 (C7J89_05745) - 1177212..1178306 (+) 1095 WP_103295304.1 YeeE/YedE family protein -
  C7J89_RS05750 (C7J89_05750) - 1178325..1178549 (+) 225 WP_061855578.1 sulfurtransferase TusA family protein -
  C7J89_RS05755 (C7J89_05755) - 1178909..1180387 (+) 1479 WP_103295303.1 sucrose-6-phosphate hydrolase -
  C7J89_RS05760 (C7J89_05760) - 1180390..1181355 (+) 966 WP_103295302.1 carbohydrate kinase -
  C7J89_RS05765 (C7J89_05765) agrA 1181411..1182136 (-) 726 WP_061855581.1 quorum-sensing response regulator AgrA Regulator
  C7J89_RS13575 (C7J89_05770) agrC 1182155..1183444 (-) 1290 WP_103295301.1 quorum-sensing sensor histidine kinase AgrC -
  C7J89_RS05775 (C7J89_05775) agrD 1183472..1183609 (-) 138 WP_061855583.1 cyclic lactone autoinducer peptide AgrD -
  C7J89_RS05780 (C7J89_05780) - 1183612..1184181 (-) 570 WP_103295300.1 accessory gene regulator AgrB -
  C7J89_RS05785 (C7J89_05785) - 1184940..1185725 (-) 786 WP_103295299.1 carbon-nitrogen family hydrolase -
  C7J89_RS05790 (C7J89_05790) - 1185857..1186486 (-) 630 WP_061855586.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 28159.00 Da        Isoelectric Point: 4.7786

>NTDB_id=280877 C7J89_RS05765 WP_061855581.1 1181411..1182136(-) (agrA) [Staphylococcus kloosii strain ATCC 43959]
MKIFICEDDTRQRDNMTSIINNYIMIEEKPMEIVKATGDPYEILEEARELDDIGCYFLDIQLEADINGIKLASEIRKHDP
VGNIIFVTSHSELTYLTFVYKIAAMDFIFKDDPDELKTRIIDCIETAETRLKLLSKDSNVDTIELKQGSNSVYVRYDDVM
FFESSAKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSYVINKNNVSAVNSKDRIIYFENQEFCFASVRNIKKIKN
T

Nucleotide


Download         Length: 726 bp        

>NTDB_id=280877 C7J89_RS05765 WP_061855581.1 1181411..1182136(-) (agrA) [Staphylococcus kloosii strain ATCC 43959]
ATGAAAATTTTCATATGTGAGGATGACACAAGGCAACGTGATAATATGACTTCAATTATAAATAACTACATTATGATTGA
AGAAAAACCTATGGAAATTGTTAAGGCAACAGGAGATCCTTATGAAATATTAGAAGAAGCCCGTGAGCTCGATGATATCG
GTTGTTATTTTTTAGATATTCAACTAGAAGCGGACATTAATGGTATTAAATTAGCAAGTGAAATACGTAAACACGACCCT
GTTGGCAATATTATATTTGTCACAAGTCACAGTGAATTAACTTACTTAACCTTTGTCTATAAAATTGCCGCTATGGATTT
TATATTTAAAGATGACCCAGATGAATTAAAAACACGCATTATTGATTGTATTGAAACAGCAGAAACGCGTTTAAAACTAC
TATCTAAAGACAGTAATGTCGATACGATTGAACTCAAACAAGGTAGTAACTCTGTATATGTACGCTATGATGACGTTATG
TTTTTTGAATCATCTGCTAAATCACATCGGTTAATCGCTCATTTAGACAATAGACAAATTGAATTCTATGGTAATTTAAA
AGAACTCAGTCAACTTGACGACCGCTTCTTTAGGTGCCATAACAGTTACGTCATAAACAAAAATAATGTGTCTGCCGTAA
ACAGTAAAGATCGCATTATATATTTCGAAAACCAAGAATTTTGTTTTGCTTCAGTGCGTAATATTAAAAAGATTAAAAAC
ACATAA

Domains

Predicted by InterproScan.

LytTr DNA-binding domain (LytTR)

(151-240)

Response regulator receiver domain (Response_reg)

(3-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A151A184

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

79.832

98.755

0.788

Multiple sequence alignment