Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | C7K70_RS18475 | Genome accession | NZ_CP027804 |
| Coordinates | 3942927..3943247 (+) | Length | 106 a.a. |
| NCBI ID | WP_106553298.1 | Uniprot ID | - |
| Organism | Aeromonas hydrophila strain KN-Mc-1R2 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3937927..3948247
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7K70_RS18450 (C7K70_18425) | - | 3938565..3939200 (-) | 636 | WP_106553295.1 | hemolysin III family protein | - |
| C7K70_RS18455 (C7K70_18430) | - | 3939425..3940930 (+) | 1506 | WP_106553296.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| C7K70_RS18460 (C7K70_18435) | - | 3941035..3941586 (+) | 552 | WP_024946223.1 | septation protein A | - |
| C7K70_RS18465 (C7K70_18440) | - | 3941612..3941908 (+) | 297 | WP_005309589.1 | YciI family protein | - |
| C7K70_RS18470 (C7K70_18445) | cysQ | 3941989..3942759 (-) | 771 | WP_180345424.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| C7K70_RS18475 (C7K70_18450) | comEA | 3942927..3943247 (+) | 321 | WP_106553298.1 | ComEA family DNA-binding protein | Machinery gene |
| C7K70_RS18480 (C7K70_18455) | galU | 3943343..3944254 (+) | 912 | WP_043119374.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| C7K70_RS18485 (C7K70_18460) | - | 3944468..3945865 (+) | 1398 | WP_011707249.1 | peptide MFS transporter | - |
| C7K70_RS18490 (C7K70_18465) | - | 3945939..3946910 (-) | 972 | WP_106553299.1 | response regulator | - |
| C7K70_RS18495 (C7K70_18470) | - | 3947251..3947928 (+) | 678 | WP_106553300.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11226.05 Da Isoelectric Point: 9.5773
>NTDB_id=280851 C7K70_RS18475 WP_106553298.1 3942927..3943247(+) (comEA) [Aeromonas hydrophila strain KN-Mc-1R2]
MNYKTLTATLLLSCLPLLSQPLQAADKPVAKPATTVTAAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLQAADKPVAKPATTVTAAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=280851 C7K70_RS18475 WP_106553298.1 3942927..3943247(+) (comEA) [Aeromonas hydrophila strain KN-Mc-1R2]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAACCTCTGCAGGCCGCCGACAA
GCCTGTTGCCAAGCCGGCAACCACGGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTCAACACCGCCAGTATCAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAAAAGGCCCAGGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGTGGCATCGGGCCAGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAACCTCTGCAGGCCGCCGACAA
GCCTGTTGCCAAGCCGGCAACCACGGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTCAACACCGCCAGTATCAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAAAAGGCCCAGGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGTGGCATCGGGCCAGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
52.727 |
100 |
0.547 |
| comEA | Vibrio cholerae strain A1552 |
52.727 |
100 |
0.547 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
43.243 |
100 |
0.453 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
53.75 |
75.472 |
0.406 |
| comEA | Vibrio campbellii strain DS40M4 |
41 |
94.34 |
0.387 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.316 |
71.698 |
0.368 |
| comEA | Legionella pneumophila str. Paris |
39.394 |
93.396 |
0.368 |
| comEA | Legionella pneumophila strain ERS1305867 |
39.394 |
93.396 |
0.368 |
| comEA | Acinetobacter baylyi ADP1 |
45.882 |
80.189 |
0.368 |