Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C7H73_RS04540 Genome accession   NZ_CP027792
Coordinates   1002057..1002461 (+) Length   134 a.a.
NCBI ID   WP_106845550.1    Uniprot ID   -
Organism   Pulveribacter suum strain SC2-7     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 997057..1007461
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7H73_RS04520 (C7H73_04505) - 997570..999324 (-) 1755 WP_106845546.1 alkaline phosphatase -
  C7H73_RS04525 (C7H73_04510) hemL 999517..1000821 (-) 1305 WP_106845547.1 glutamate-1-semialdehyde 2,1-aminomutase -
  C7H73_RS04530 (C7H73_04515) - 1000805..1001734 (-) 930 WP_106845548.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  C7H73_RS04535 (C7H73_04520) - 1001829..1002002 (+) 174 WP_106845549.1 rubredoxin -
  C7H73_RS04540 (C7H73_04525) pilG 1002057..1002461 (+) 405 WP_106845550.1 PleD family two-component system response regulator Regulator
  C7H73_RS04545 (C7H73_04530) - 1002461..1002826 (+) 366 WP_106845551.1 PleD family two-component system response regulator -
  C7H73_RS04550 (C7H73_04535) - 1002844..1003371 (+) 528 WP_106845552.1 chemotaxis protein CheW -
  C7H73_RS04555 (C7H73_04540) - 1003403..1005673 (+) 2271 WP_106845553.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14944.19 Da        Isoelectric Point: 6.9235

>NTDB_id=280789 C7H73_RS04540 WP_106845550.1 1002057..1002461(+) (pilG) [Pulveribacter suum strain SC2-7]
MATTTTAPTFRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNPR
FADTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQVVQQFANAQQGVQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=280789 C7H73_RS04540 WP_106845550.1 1002057..1002461(+) (pilG) [Pulveribacter suum strain SC2-7]
TTGGCTACGACGACAACCGCTCCCACGTTCAGGGTATTGGTGGTGGACGACAGCAACACCATCCGGCGCAGCGCCGAAAT
CTTCCTCAAGCAGGGCGGCCACGAGGTGCTGCTGGCCGACGACGGCTTCGACGCGCTGGCCAAGGTCAACGATTACCAGC
CCCAGCTGATCTTCTGCGACATCCTCATGCCCAAGCTGGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACCCGCGC
TTTGCCGACACGCCGGTGGTCATGCTCTCGTCCAAGGACGGGGTGTTCGACAAGGCGCGCGGGCGCATGGTGGGCTGCCA
GGAATATTTGACGAAGCCTTTCACCAAGGACCAGTTGCTGCAAGTGGTGCAGCAATTTGCCAACGCTCAACAAGGAGTGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-123)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

53.719

90.299

0.485

Multiple sequence alignment