Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   C7M53_RS17910 Genome accession   NZ_CP027789
Coordinates   3370163..3372484 (-) Length   773 a.a.
NCBI ID   WP_026080865.1    Uniprot ID   A0AAP9USS4
Organism   Bacillus licheniformis strain TAB7     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3365163..3377484
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M53_RS17870 (C7M53_17845) - 3365625..3366056 (+) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -
  C7M53_RS17875 (C7M53_17850) - 3366056..3366397 (+) 342 WP_003184836.1 Na(+)/H(+) antiporter subunit C -
  C7M53_RS17880 (C7M53_17855) - 3366390..3367868 (+) 1479 WP_003184838.1 Na+/H+ antiporter subunit D -
  C7M53_RS17885 (C7M53_17860) - 3367874..3368350 (+) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  C7M53_RS17890 (C7M53_17865) - 3368350..3368634 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  C7M53_RS17895 (C7M53_17870) mnhG 3368618..3368992 (+) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  C7M53_RS17900 (C7M53_17875) - 3369032..3369421 (-) 390 WP_003184847.1 hotdog fold thioesterase -
  C7M53_RS17905 (C7M53_17880) comA 3369438..3370076 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  C7M53_RS17910 (C7M53_17885) comP 3370163..3372484 (-) 2322 WP_026080865.1 ATP-binding protein Regulator
  C7M53_RS17915 (C7M53_17890) comX 3372524..3372688 (-) 165 WP_011198251.1 competence pheromone ComX -
  C7M53_RS17920 (C7M53_17895) - 3372703..3373572 (-) 870 WP_011198252.1 polyprenyl synthetase family protein -
  C7M53_RS17925 (C7M53_17900) degQ 3373761..3373901 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  C7M53_RS17935 (C7M53_17910) - 3374387..3374734 (+) 348 WP_009329512.1 hypothetical protein -
  C7M53_RS17940 (C7M53_17915) - 3374777..3375997 (-) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 773 a.a.        Molecular weight: 88433.46 Da        Isoelectric Point: 6.3438

>NTDB_id=280762 C7M53_RS17910 WP_026080865.1 3370163..3372484(-) (comP) [Bacillus licheniformis strain TAB7]
MRVNYNKLSLIIILLSLSLVPYIIYVNLHSSYLGMTMQFNEKNEYQVFEIEKGSLAQSLGFKKGDVILEINGKSVEKLRA
DDGKLADELSDVKSMIVERDGEIGFVETGYELVSYESLFLFIIPMMFYLLSLFCVYFIIKSNKRLNSASAFILIVFLLVT
STAYSCSVGSAKGDSLSIYITMITFQFVPVLYLHYIYQYFKEKGKEFFNNKIFLFLYPVGLLNLLLEISGDNLQISYSSI
KLFNLVSFLVVTIIAFALIIYGVIKNKASEQAYFLRILVITNFVAFIPFLIFYVIPYVFIGDYIFPAMFVVPFLLIIPFS
LVYQFIATKIYDIEFLLGRFKYYGLLAILPSLTAVGVFTLTQELSNSLNTVKNTIFIYFIMLGVFYLKEILDFRFRLKRF
SEKFNYQDSVFKFTQLIRSSTSLAQVLRELSQTILDVLPVSQAYVLELKSDGTVGLLENNANDQVWKPYEKEAFRAITDI
GKIVEVDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLENVKKEGPNPAWL
NKLMFAIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSAVIQTTRETCQELRPQL
LYDLGLVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSRANEVLIMLVCIKEKVVLHY
EDDGIGVDPDKLYQNSASMGLSGIRERVRALNGSLDIQTAEGKGFRVAIEMGL

Nucleotide


Download         Length: 2322 bp        

>NTDB_id=280762 C7M53_RS17910 WP_026080865.1 3370163..3372484(-) (comP) [Bacillus licheniformis strain TAB7]
ATGCGTGTTAATTATAATAAACTATCTTTAATTATTATTTTGCTAAGCCTCTCCTTGGTTCCTTATATTATCTATGTAAA
TCTGCATTCTAGTTACCTTGGAATGACAATGCAATTTAATGAAAAAAACGAATACCAAGTATTCGAGATTGAAAAAGGGT
CACTGGCTCAATCCCTAGGATTTAAAAAAGGGGATGTTATTCTAGAGATAAATGGTAAAAGTGTAGAAAAATTAAGGGCT
GATGATGGGAAATTAGCTGATGAATTAAGTGATGTTAAATCGATGATCGTTGAAAGAGATGGAGAGATAGGGTTTGTAGA
GACCGGATATGAATTGGTGAGTTATGAAAGTCTATTTCTATTTATTATTCCAATGATGTTTTATCTCCTTTCTCTTTTTT
GTGTTTATTTCATAATAAAATCAAACAAAAGATTAAATTCGGCTTCAGCTTTTATTTTAATTGTTTTTCTGCTTGTTACA
TCAACAGCTTATTCTTGTTCTGTGGGATCTGCAAAGGGAGATAGTTTAAGTATCTATATAACAATGATAACTTTTCAATT
CGTTCCTGTTTTGTATCTCCACTATATTTATCAATATTTCAAGGAAAAAGGAAAAGAGTTTTTCAATAATAAAATATTTC
TTTTCCTATACCCTGTGGGTTTATTGAATTTGCTATTGGAAATTTCCGGTGATAATTTGCAGATTTCTTATAGTTCCATT
AAGCTCTTTAACCTGGTATCTTTCTTGGTTGTTACCATTATAGCCTTTGCTCTTATCATTTATGGTGTAATAAAAAATAA
AGCTTCTGAGCAAGCCTATTTTTTAAGGATACTTGTTATCACAAATTTTGTTGCGTTTATTCCGTTCTTAATTTTCTATG
TCATTCCATATGTATTTATCGGTGATTATATATTCCCGGCAATGTTTGTTGTACCCTTTTTGTTGATTATTCCTTTCTCA
TTAGTGTATCAATTTATTGCTACCAAAATATATGACATTGAATTCTTATTGGGACGTTTTAAATACTATGGATTGTTAGC
CATTTTACCAAGCTTGACAGCTGTAGGTGTATTTACTTTAACACAAGAATTAAGTAATAGTCTAAATACAGTTAAAAACA
CTATATTTATCTATTTTATTATGCTAGGTGTTTTTTATCTCAAAGAAATTCTTGATTTTCGTTTCCGTTTAAAAAGGTTT
TCTGAAAAATTTAATTACCAAGATAGTGTATTTAAGTTTACCCAACTTATACGGAGCTCGACATCGTTAGCGCAAGTGCT
AAGGGAATTGTCTCAAACGATTCTTGATGTTTTACCTGTCAGCCAGGCTTATGTACTGGAGTTAAAGAGTGATGGAACCG
TAGGGTTACTTGAAAATAATGCAAACGATCAAGTTTGGAAGCCTTATGAAAAAGAAGCTTTTAGGGCTATCACCGACATC
GGCAAAATCGTCGAAGTCGACCGTGGGTTTTTGATTAAGATCGGTGAACGGGGCGGGACGTCTTATGTCATGCTGTGTTT
GTCGGTTTTAAATACGCCTAGGCTGACGCGCGATGAGATTTCATGGCTTGAGACGCTGGCGTTTTATACGAGCGTTTCCC
TGGAAAACGTGCTGAAAATCGGCGAGCTGATGGAGCATCTGGAAAATGTGAAAAAAGAAGGGCCGAATCCGGCGTGGCTG
AATAAATTGATGTTTGCGATTGAAGAGAAGCAGAGATCTGATTTAGCCCGCGATCTCCACGACTCTGTCCTGCAGGATAT
GATTTCCTTGAAGCATCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTACGAATCAAATCCGGCAAA
GGCTCATCAATATGAATGAGCAAATGTCCGCCGTCATCCAGACGACAAGGGAAACGTGCCAGGAGCTGAGGCCGCAGCTG
TTGTACGATCTCGGACTTGTCAAAGCCCTTTCGAAACTGGCGGCGCAGCATCAGGAGTCCTCATCGATCGATAAGATCCG
CCTCAATACGGAAAGGTTCTCAAAGGTGCTCGACTTGGACACGCAGTTGAATTTGTACAGAATTGTGCAGGAGCTTTTAA
GCAATGCGGTTAAACATTCGAGAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTAT
GAAGATGACGGCATTGGGGTTGACCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCTGTCGGGCATTCGCGAGCG
CGTCCGCGCACTGAACGGCAGTCTGGATATACAGACAGCAGAAGGGAAAGGCTTTAGGGTCGCCATTGAAATGGGATTGT
AA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

52.202

99.871

0.521


Multiple sequence alignment