Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   C7M53_RS14030 Genome accession   NZ_CP027789
Coordinates   2651657..2653387 (-) Length   576 a.a.
NCBI ID   WP_119953872.1    Uniprot ID   -
Organism   Bacillus licheniformis strain TAB7     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2646657..2658387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M53_RS14000 (C7M53_13990) - 2647113..2647433 (-) 321 WP_003183355.1 hypothetical protein -
  C7M53_RS23895 - 2647432..2647764 (+) 333 WP_223307051.1 hypothetical protein -
  C7M53_RS14010 (C7M53_14000) - 2647919..2648302 (-) 384 WP_003183357.1 serine O-acetyltransferase -
  C7M53_RS14015 (C7M53_14005) - 2648433..2648636 (-) 204 WP_231082760.1 LCI fold-containing protein -
  C7M53_RS14020 (C7M53_14010) spo0A 2649101..2649901 (-) 801 WP_003183361.1 sporulation transcription factor Spo0A Regulator
  C7M53_RS14025 (C7M53_14015) spoIVB 2650191..2651507 (-) 1317 WP_044051837.1 SpoIVB peptidase -
  C7M53_RS14030 (C7M53_14020) recN 2651657..2653387 (-) 1731 WP_119953872.1 DNA repair protein RecN Machinery gene
  C7M53_RS14035 (C7M53_14025) ahrC 2653419..2653868 (-) 450 WP_003183369.1 transcriptional regulator AhrC/ArgR -
  C7M53_RS14040 (C7M53_14030) - 2654034..2654879 (-) 846 WP_003183371.1 TlyA family RNA methyltransferase -
  C7M53_RS14045 (C7M53_14035) dxs 2654876..2656777 (-) 1902 WP_003183372.1 1-deoxy-D-xylulose-5-phosphate synthase -
  C7M53_RS14050 (C7M53_14040) - 2657011..2657901 (-) 891 WP_003183374.1 polyprenyl synthetase family protein -
  C7M53_RS14055 (C7M53_14045) - 2657891..2658151 (-) 261 WP_011198110.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 576 a.a.        Molecular weight: 64523.33 Da        Isoelectric Point: 4.8010

>NTDB_id=280744 C7M53_RS14030 WP_119953872.1 2651657..2653387(-) (recN) [Bacillus licheniformis strain TAB7]
MLAELSIKNFAIIEELTVSFEKGLTVLTGETGAGKSIIIDAVSLLVGGRGSSEYVRYGEKRAELEGLFLLDGGHPVFDLC
TELGIEASDDMIVMRRDINANGKSICRVNGKLVTIAALREVGRLLLDIHGQHDNQLLMEDEHHLQLLDRFAGEEIENALK
AYQEVYSRYMDVMKKVKELSESEQEMAHRLDLIQFQLDEIESANLEPKEDELLQEERRQIANFEKIYEALQNAYNALRNE
QAGLDWVGMASSELENVSGINEGLNKVSESVANAYYILEDSTFQIRNMLDELEYDPQRLDYIESRLNEIKQLKRKYGATV
EDIQAYSAKIEEEIDRIENRDSHLQALKSRLESIGKDVAIEAANVSEIRKKWAEKLAKQIQQELKDLYMEKSTFDTEFHV
KKAERDDDAPVVNGMPVQLTKHGIDTVRFLISTNTGEPLKSLSKVASGGELSRIMLAMKSIFSAQQDVTSIIFDEVDTGV
SGRVAQAIAEKIHRVSIGSQVLCITHLPQVAAMADTHLLITKQSKDGRTTTSVTPLSKQEKIAEIGRMIAGVEVTDLTKR
HAKELLNQAKLVKTSG

Nucleotide


Download         Length: 1731 bp        

>NTDB_id=280744 C7M53_RS14030 WP_119953872.1 2651657..2653387(-) (recN) [Bacillus licheniformis strain TAB7]
TTGTTAGCTGAATTATCGATCAAAAACTTTGCGATTATCGAAGAATTAACCGTTTCTTTTGAAAAAGGGCTGACGGTTCT
AACCGGTGAAACAGGTGCCGGAAAATCGATCATCATCGACGCCGTCTCTTTGCTTGTCGGAGGCCGCGGATCGTCCGAAT
ATGTCAGGTATGGCGAAAAAAGGGCCGAATTGGAAGGGCTTTTCCTCCTTGACGGCGGCCATCCGGTTTTTGATTTGTGC
ACAGAGCTGGGGATTGAAGCCTCGGACGACATGATCGTCATGAGAAGAGATATTAACGCAAACGGCAAAAGCATCTGCCG
CGTCAATGGAAAACTTGTCACCATTGCCGCATTGCGGGAAGTCGGCAGACTGCTGCTTGACATTCACGGGCAGCACGACA
ATCAGCTGCTGATGGAGGACGAGCACCATCTTCAGCTTCTGGACAGGTTCGCAGGAGAAGAAATCGAGAATGCTTTAAAA
GCGTATCAGGAAGTTTACAGCCGCTACATGGATGTCATGAAGAAGGTGAAAGAGCTTTCTGAAAGCGAGCAGGAAATGGC
TCACAGGCTCGATTTAATACAGTTCCAGCTTGACGAAATCGAATCAGCAAACCTTGAGCCGAAAGAGGACGAGCTTCTTC
AGGAAGAGCGCCGTCAAATTGCAAATTTCGAAAAAATATACGAAGCGCTGCAAAATGCCTATAATGCGCTTCGCAATGAG
CAGGCCGGGCTTGACTGGGTCGGCATGGCTTCAAGCGAGCTTGAAAACGTCTCAGGCATTAATGAAGGGCTCAATAAAGT
ATCTGAATCGGTAGCCAACGCTTACTACATTCTCGAAGATTCAACCTTTCAGATCAGAAATATGCTGGATGAACTCGAAT
ACGACCCCCAGCGCCTCGATTATATCGAATCGCGTTTAAACGAAATCAAACAGCTGAAACGCAAATACGGCGCTACTGTC
GAAGACATCCAAGCTTATTCGGCTAAGATAGAGGAAGAAATCGACCGGATCGAAAACCGGGACAGCCACTTGCAGGCTTT
AAAATCACGACTCGAATCAATCGGCAAGGATGTGGCGATTGAAGCAGCCAATGTGTCCGAAATCAGAAAAAAATGGGCGG
AAAAGCTGGCCAAACAGATTCAGCAGGAATTGAAAGATCTGTATATGGAAAAATCGACATTTGATACGGAATTTCATGTG
AAAAAAGCGGAACGGGATGATGATGCACCCGTCGTCAACGGAATGCCTGTTCAGCTCACAAAGCACGGCATTGACACCGT
TCGTTTCCTGATCTCCACAAACACGGGAGAACCGCTTAAATCCTTGTCAAAGGTTGCTTCAGGAGGAGAGCTCTCAAGAA
TCATGCTGGCGATGAAAAGCATTTTCTCCGCTCAGCAGGATGTTACATCGATCATTTTCGATGAAGTGGACACTGGTGTA
AGCGGAAGAGTCGCGCAGGCGATCGCTGAAAAAATACACCGCGTCTCTATCGGCTCTCAAGTTTTATGCATTACCCACTT
GCCGCAGGTGGCCGCGATGGCTGACACCCACCTTTTGATCACGAAACAGTCGAAAGACGGGAGAACAACAACAAGCGTCA
CACCTTTGTCAAAACAGGAAAAAATAGCGGAAATCGGCCGGATGATTGCCGGCGTTGAAGTAACGGATTTGACGAAGCGC
CATGCGAAAGAACTTTTAAATCAAGCTAAGCTAGTCAAAACCAGCGGATAA

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-231)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

81.076

100

0.811

Multiple sequence alignment