Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   C7M53_RS08320 Genome accession   NZ_CP027789
Coordinates   1591377..1591958 (+) Length   193 a.a.
NCBI ID   WP_059260800.1    Uniprot ID   -
Organism   Bacillus licheniformis strain TAB7     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1586377..1596958
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M53_RS08290 (C7M53_08275) - 1586683..1587135 (+) 453 WP_011197942.1 flavodoxin -
  C7M53_RS08295 (C7M53_08280) dapD 1587241..1587951 (+) 711 WP_003181319.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  C7M53_RS08300 (C7M53_08285) - 1588020..1589144 (+) 1125 WP_003181321.1 N-acetyldiaminopimelate deacetylase -
  C7M53_RS08305 (C7M53_08290) - 1589207..1589452 (+) 246 WP_003181323.1 YkuS family protein -
  C7M53_RS08310 (C7M53_08295) ahpA 1589747..1590289 (+) 543 WP_003181325.1 biofilm-specific peroxidase AhpA -
  C7M53_RS08315 (C7M53_08300) - 1590371..1590829 (+) 459 WP_003181327.1 TlpA family protein disulfide reductase -
  C7M53_RS08320 (C7M53_08305) rok 1591377..1591958 (+) 582 WP_059260800.1 transcriptional regulator Rok Regulator
  C7M53_RS08325 (C7M53_08310) - 1592104..1593060 (-) 957 WP_009328583.1 hypothetical protein -
  C7M53_RS08330 (C7M53_08315) mobA 1593213..1593800 (+) 588 WP_003181331.1 molybdenum cofactor guanylyltransferase -
  C7M53_RS08335 (C7M53_08320) - 1593906..1594919 (+) 1014 WP_011197943.1 molybdopterin-synthase adenylyltransferase MoeB -
  C7M53_RS08340 (C7M53_08325) glp 1594939..1596231 (+) 1293 WP_003181335.1 gephyrin-like molybdotransferase Glp -
  C7M53_RS08345 (C7M53_08330) mobB 1596198..1596725 (+) 528 WP_003181336.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 22281.23 Da        Isoelectric Point: 9.9960

>NTDB_id=280733 C7M53_RS08320 WP_059260800.1 1591377..1591958(+) (rok) [Bacillus licheniformis strain TAB7]
MFNEREALRLRLEQLNEAEVKVIREYQIERDNIYAKLRELDRPSSFNDTKKDFRPERKTESLPVLAELAAQEMKSYQQQQ
PQASQKNQQQTSPQTSSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTT
FMQSLIKMYPEVKKPYRGQYILEGEISTETEQQ

Nucleotide


Download         Length: 582 bp        

>NTDB_id=280733 C7M53_RS08320 WP_059260800.1 1591377..1591958(+) (rok) [Bacillus licheniformis strain TAB7]
ATGTTTAACGAGAGGGAAGCATTGCGTTTAAGATTAGAGCAGCTGAACGAGGCTGAAGTTAAGGTGATTAGGGAGTATCA
AATTGAGCGGGATAACATATATGCAAAGCTGCGTGAATTGGATCGTCCATCCAGCTTTAATGATACAAAAAAAGATTTTC
GCCCGGAGCGTAAAACTGAATCTCTCCCTGTTTTAGCTGAATTGGCTGCACAGGAGATGAAGAGCTACCAGCAACAGCAG
CCGCAAGCATCTCAAAAGAACCAGCAGCAGACTTCTCCGCAAACCTCCTCACTGCCTGCCGGAATTCCAGATGGAACGAC
AAGGCGCAGAAGGGGTACAGCACGTCCAGGCTCAAAAGCTGCAAAATTGCGTGAAGCGGCGATTAAAACATTAAAACGCC
ATAATGCGGCCATCAAAAGCTCCGAACTTCAAAAAGAAATCGAAAAAGAGAGCGGACTTGAGATCCCTAATATGACAACC
TTTATGCAAAGCCTGATTAAAATGTACCCGGAAGTCAAAAAACCATACCGCGGTCAATATATATTAGAGGGTGAGATTTC
TACTGAGACAGAGCAGCAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

84.043

97.409

0.819

Multiple sequence alignment